Query= MSMg01no161_d13.b1 MSMg01no161_d13.b1 CHROMAT_FILE:
MSMg01no161_d13.b1 PHD_FILE: MSMg01no161_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:35 2005
(420 letters)
>mm_chr2_44163039_44163858
Length = 820
Score = 679 bits (351), Expect = 0.0
Identities = 387/403 (96%), Gaps = 8/403 (1%)
Strand = Plus / Plus
Query: 15 ggaattcttagcaacgggtgtcagctgccctctctggacagctttgtttgaccagaggaa 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ggaattcttagcaacgggtgtcagctgccctctctggacagctttgtttgaccagaggaa 274
Query: 75 gagaaagcagatgcagtctctttccagtacaatgtctcagtagaggtttgttactaaact 134
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gagaaagtagatgcagtctctttccagtacaatgtctcagtagaggtttgttactaaact 334
Query: 135 ccagaatgaacagcaccggtccttgttttgaaagatggctgcccatctttcacaccttca 194
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 335 ccagaatgaacagcactggtccttgttttgaaagatggctgcccatcttccacaccttca 394
Query: 195 cctcaattatgttgcagacactgccagccatttctgacaccaggagcgaaacagaagcca 254
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 395 cctcaattattttgcagacactgccagccatttctgacaccaggagcaaaacagaagcca 454
Query: 255 aagagcggcaatgcaaatggtgccctgggtttgggatccgagctaagtagatgcttagtt 314
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 455 aagagcggcaatgcaaatggtgccctgggtttgggatctgagctaagtagatgcttagtt 514
Query: 315 tcccctgtaaggtcgctattcttgagttataaatttagacccttccatgggcaga----t 370
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 515 tcccctgtaaggtcgctattcttgagttataaatttagatccttccatgggcagacaaat 574
Query: 371 tttttagtttcaagcttactttaaagaaagatgtgctatttat 413
||||||||||||||||||||||||||||||||||||||
Sbjct: 575 a----agtttcaagcttactttaaagaaagatgtgctatttat 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_d13.g1 MSMg01no161_d13.g1 CHROMAT_FILE:
MSMg01no161_d13.g1 PHD_FILE: MSMg01no161_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:35 2005
(164 letters)
>mm_chr2_44285797_44286359
Length = 563
Score = 292 bits (151), Expect = 7e-84
Identities = 160/163 (98%), Gaps = 1/163 (0%)
Strand = Plus / Minus
Query: 1 ccatcacagagcaagctatagcatcagccacaactcaaacaggtcgctgaaaggtgcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccatcacagagcaagctatagcatcagccacaactcaaacaggtcgctgaaaggtgcatt 303
Query: 61 tcatcagcaagcaatttcagtcatatcaaagcaactttaccccaactgagtggcaaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcatcagcaagcaatttcagtcatatcaaagcaactttaccccaactgagtggcaaccag 243
Query: 121 ctactttggaaagcaggcgactgcggggggggatgggggtggg 163
|||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 242 ctactttggaaagcaggcgactgc-gggggggatgggggtggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 563
Length adjustment: 8
Effective length of query: 156
Effective length of database: 555
Effective search space: 86580
Effective search space used: 86580
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
