Query= MSMg01no161_n13.b1 MSMg01no161_n13.b1 CHROMAT_FILE:
MSMg01no161_n13.b1 PHD_FILE: MSMg01no161_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:55 2005
(369 letters)
>mm_chr2_162927808_162928576
Length = 769
Score = 530 bits (274), Expect = e-155
Identities = 326/352 (92%), Gaps = 16/352 (4%)
Strand = Plus / Minus
Query: 17 gaattcctctctctctctctttctctgtctctctgtgtgtctctctctgtgtctctctct 76
|||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||
Sbjct: 733 gaattcctctctctctctctttctctgtctctctctgtgtctctctctgtctgtctctct 674
Query: 77 ctgtgtctctctgtgtgtctctccctgtctctgtctctgtctttgtgtctctctctgtct 136
|||||||||||| ||| ||||||||||||||||| ||| |||||||||
Sbjct: 673 ctgtgtctctctctgt--------ctgtctctgtctctgtc------tctgtctctgtct 628
Query: 137 ctgtctctgtctctgtctc--tctctctctctctctctcacacacacacacacacacaca 194
||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||
Sbjct: 627 ctgtctctgtctctgtctctgtctctctctctctcacacacacacacacacacacacaca 568
Query: 195 ccagctctcgggccaagcacaactgcctaaggtgaaaacctcccagtcacctagctccct 254
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 567 ccagctctcgggccaagcacaactgcctaaagtgaaaacctcccagtcacctagctccct 508
Query: 255 gtaggaagtatcgccagctgctgtaaactgcaacttcatattaaatgtaccttctctgtc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gtaggaagtatcgccagctgctgtaaactgcaacttcatattaaatgtaccttctctgtc 448
Query: 315 gcgatgtgtctcctagacacacaacagcctgggcttgagaaggggttggcgg 366
||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 447 gcgatgtgtctcctaaacacacaacagcctgggcttgagaaggggttagcgg 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_n13.g1 MSMg01no161_n13.g1 CHROMAT_FILE:
MSMg01no161_n13.g1 PHD_FILE: MSMg01no161_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:55 2005
(131 letters)
>mm_chr2_162769687_162770217
Length = 531
Score = 236 bits (122), Expect = 4e-67
Identities = 125/126 (99%)
Strand = Plus / Plus
Query: 1 cccaccccacccccaagtgtgctgtgtgcatccaccactaactgccctgtttctccagca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 cccaccccacccccaagtgtgctgtgtgcatccaccactagctgccctgtttctccagca 260
Query: 61 cctaccaccggggcttttattggatgtctgctgtttgtattatggtctcaaaaaactctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctaccaccggggcttttattggatgtctgctgtttgtattatggtctcaaaaaactctg 320
Query: 121 gtgtgg 126
||||||
Sbjct: 321 gtgtgg 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 131
Length of database: 531
Length adjustment: 8
Effective length of query: 123
Effective length of database: 523
Effective search space: 64329
Effective search space used: 64329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
