Query= MSMg01no162_g05.b1 MSMg01no162_g05.b1 CHROMAT_FILE:
MSMg01no162_g05.b1 PHD_FILE: MSMg01no162_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:45 2005
(240 letters)
>mm_chr2_142377086_142377725
Length = 640
Score = 406 bits (210), Expect = e-118
Identities = 237/254 (93%), Gaps = 15/254 (5%)
Strand = Plus / Minus
Query: 1 gtggctttggtctcagatttag-------------gatttcaaaaaacaagacaaacagc 47
|||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 379 gtggctttggtctcagatttaggatttcgaactaagatttcaaaaaacaagacaaacagc 320
Query: 48 atttttggcttcttccaaagtgatttttgcaaataggtccaaatagtgtaacagaatgat 107
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 319 atttttggcttcttccaaagtgatttttgcaaatagatcctaatagtgtaacagaatgat 260
Query: 108 aaggtagtcctaaaattgtacaaagtatatatatgtatgctttatctatgtttatatgat 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaggtagtcctaaaattgtacaaagtatatatatgtatgctttatctatgtttatatgat 200
Query: 168 gtatatgtacacacatatgtatatgtgcatgtatatatatgtgtgtgtgtgta-agcaca 226
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 199 gtatatgtacacacatatgtatatgtgcatgtatatatatgtgtgtgtgtgtaca-caca 141
Query: 227 tatattttttctat 240
||||||||||||||
Sbjct: 140 tatattttttctat 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no162_g05.g1 MSMg01no162_g05.g1 CHROMAT_FILE:
MSMg01no162_g05.g1 PHD_FILE: MSMg01no162_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:45 2005
(171 letters)
>mm_chr2_142215150_142215720
Length = 571
Score = 313 bits (162), Expect = 3e-90
Identities = 168/170 (98%)
Strand = Plus / Plus
Query: 2 tatatcagcagtgatttataagatccttaaagataccatatgccatcaattacagttcag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tatatcagcagtgatttataagatccttaaagataccatatgccatcaattacagttcag 261
Query: 62 ataggcaaagctctttgatagtcaaataagctatttctaggcctgtttgaggactgatat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 262 ataggcaaagctctttgatagtcaaataagctatttctaggcctgtttgaggactgagag 321
Query: 122 acatttcaagtgcttcgttaaaaaggtactccttgctaagccttgtgaag 171
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acatttcaagtgcttcgttaaaaaggtactccttgctaagccttgtgaag 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
