Query= MSMg01no162_o13.b1 MSMg01no162_o13.b1 CHROMAT_FILE:
MSMg01no162_o13.b1 PHD_FILE: MSMg01no162_o13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:23 2005
(641 letters)
>mm_chr2_73661876_73662915
Length = 1040
Score = 1207 bits (624), Expect = 0.0
Identities = 633/636 (99%), Gaps = 1/636 (0%)
Strand = Plus / Minus
Query: 5 gaattctacaaccacctatacttttttttttatgtgcattggtgttttgcctgcatatat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaattctacaaccacctatacttttttttttatgtgcattggtgttttgcctgcatatat 797
Query: 65 tgtctatgacagagtgttagatcaccctggacttggagttacatgcagttgtgagctgct 124
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tgtctatgagagagtgttagatcaccctggacttggagttacatgcagttgtgagctgct 737
Query: 125 atgtggatgctgagaattgaaccctcgtcctctgaaagagcaaccagtgctcttaactac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 atgtggatgctgagaattgaaccctcgtcctctgaaagagcaaccagtgctcttaactac 677
Query: 185 taagccatctctccagctcttaccatcaattttgaagtacagtagtctaaggattcttta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 taagccatctctccagctcttaccatcaattttgaagtacagtagtctaaggattcttta 617
Query: 245 acctcttactgattagggatatgctagcataaattgtgttctgtgctttaatacagtgtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 acctcttactgattagggatatgctagcataaattgtgttctgtgctttaatacagtgtt 557
Query: 305 gctagttttgttgggctgtacaaaactatttgtacttgattttttagattgcttgacttt 364
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 556 gctagttttgttgggctgtagaaaactatttgtacttgattttttagattgcttgac-tt 498
Query: 365 ttttttttttcgtggttttgtctttaggaaggcctaaacactaatttgctaaaagcacat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttttttttttcgtggttttgtctttaggaaggcctaaacactaatttgctaaaagcacat 438
Query: 425 tcagctttctagtttaagaggtagggtagaggttgggtttggtgatgcacactgaattat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tcagctttctagtttaagaggtagggtagaggttgggtttggtgatgcacactgaattat 378
Query: 485 aatcccagcacttgggtctagggcaggaggattgctacagtttagaggcaaacctgggat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aatcccagcacttgggtctagggcaggaggattgctacagtttagaggcaaacctgggat 318
Query: 545 gcactgataccctgtctcaaaaagtgagatgtcagtagactgtgtgcctacaattttatg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gcactgataccctgtctcaaaaagtgagatgtcagtagactgtgtgcctacaattttatg 258
Query: 605 tatgccagcttcttaaatatttgcatttgttaatac 640
||||||||||||||||||||||||||||||||||||
Sbjct: 257 tatgccagcttcttaaatatttgcatttgttaatac 222
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1040
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1030
Effective search space: 649930
Effective search space used: 649930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_o13.g1 MSMg01no162_o13.g1 CHROMAT_FILE:
MSMg01no162_o13.g1 PHD_FILE: MSMg01no162_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:23 2005
(314 letters)
>mm_chr2_73566218_73566930
Length = 713
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 1 taaggatagatgtcttacaattaccatgcaaaatagttttaactctgaggattctgggcc 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 taaggatagatgtcttacaattac-atgcaaaatagttttaactctgaggattctgggcc 259
Query: 61 tctgggttgcactctgaaaatgatgattctaaatcaccatttctttaatgtattgagagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctgggttgcactctgaaaatgatgattctaaatcaccatttctttaatgtattgagagt 319
Query: 121 acaggataaagtgaggtaagagatcttccacctgataagacacatataaataaactaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acaggataaagtgaggtaagagatcttccacctgataagacacatataaataaactaatg 379
Query: 181 ggaacagagaggattggaaaccctgtgtttctttagcacagagcagtagctaattgaaat 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggaaaagagaggattggaaaccctgtgtttctttagcacagagcagtagctaattgaaat 439
Query: 241 agagttatcaagaaccaagaagcagtagattctgatctccatgggtgtcttaaaagctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agagttatcaagaaccaagaagcagtagattctgatctccatgggtgtcttaaaagctct 499
Query: 301 ggcatctttct 311
|||||||||||
Sbjct: 500 ggcatctttct 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
