TTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACCAATTCCCAATAAGGAAATTAGCAACAACTCAATGTGTTTCA
TGCAAAGGGATTTAGTGCTGAGATTTGCTCCAAAAGTTCAGAAAACCTAG
AGAAGTACAAAGCATCATGGGGTTGGTATAATTCCCTCCGTTTGGCCTCC
AGGGTAATTCCTTTAGTGCTCAGAAACTGGGCAGTAGAAACTACCTCACC
AGACTGCCCTGACCTCTGACTTTGGCTTGTTTGGGACAATGTGAGGCACT
GGCACACGGCAAAGGACAGAGGAGGCTGAGGTCAGAGCTTGATAGGTCTC
TTCCCTGTGTTTTTGGCTAACGCCCGCAGGGCACTGCTCAGATAGCCACA
GAGCCTCTTCTGCTGCTTCGTCCTGCAGCTGGTGGTGTCATGCTGGAAAT
ACTGCCAGGGACAGAAGAACAAAACCAAAAACAGAAAACCAAAAGGACGG
AGTCTCATCCTGCTGATTTCCAGTTTCCCACCGCTGCCTCGAATTGGCAA
AACCAAACCAGAAGCCATGATAAGGCAGCCTGCCACATGGCGTTATTCAC
ATAGTTTTTATCCCCTTGGTAGAGTATGGTGTGCAGAGAGGCCACAGAGA
ATCAGTAGAGTTAGAGACAACAGCACAAAACTAACTTTGATTTTGTTGTT
TTGTTTTAAGCCAGCATCTCCTGGGCTCAAAGTGGGGGAT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGTCTGGGTAATCTTGAGTTTGTCTG
TCGGGGACGGACAAATGAGATGGTGCTGCAGGGAGCAGAAGTAGTGGTAA
AGACCCAGAAGTCTCTGGCATGGGTGCTAATAAAGGCTTAGGTTCAGATA
ACCACATCTTAAAGTGTAGCCTAAGGGCTCCTACAGGGTTCCTCCCTGAA
ACATGCTTCAGAGAGTTCTTTGTATCTTTGCTAATGCGTTCTTTTCTTTT
TCTTAAGAGTTTTTAGAGAATTTCCAGACTTTGTGACACATGGTGCAATC
ACACCGTTGTTTTATACCCCCCCCGCGCCTTTGTATGTCCTAGTGTGACA
AAAATCTTAAAGTACCACATACTGATATTTGTAACCCACCCAAATGGGTT
TGGGTTTTATTAGCTGTTTTCATATTACTGTGGTAGAACGCCTGACAAGA
ACAGCTTAAGGAAAAAAGTGCTTTGCCTCCATCTTGCACATCTCAGGGTT
TGACCTGTCAGGGGTGCTGGGAAATGAAGACAATGCTAACATTGGGATTG
GGTGGGCTGTGTGCTTCATTGAAGATGTACCAGCATCAGCCAGGAAACTG
TTTATTTTATACATCTAAGTGGAAGAGGCAAGTTTAGCTCATCTTGGTAG
GGGTCTCTGCAGGCCAGTATAGGCTCAGGCTCTATCACTN

Query= MSMg01no163_b14.b1 MSMg01no163_b14.b1 CHROMAT_FILE:
MSMg01no163_b14.b1 PHD_FILE: MSMg01no163_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:37 2005
         (317 letters)



>mm_chr2_70485470_70486186
          Length = 717

 Score =  582 bits (301), Expect = e-171
 Identities = 307/309 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaccaattcccaataaggaaattagcaacaactcaatgtgtttcatgcaaaggga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccaattcccaataaggaaattagcaacaactcaatgtgtttcatgcaaaggga 264

                                                                       
Query: 65  tttagtgctgagatttgctccaaaagttcagaaaacctagagaagtacaaagcatcatgg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttagtgctgagatttgctccaaaagttcagaaaacctagagaagtacaaagcatcatgg 324

                                                                       
Query: 125 ggttggtataattccctccgtttggcctccagggtaattcctttagtgctcagaaactgg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggttggtataattccctccgtttggcctccagggtaattcctttagtgctcagaaactgg 384

                                                                       
Query: 185 gcagtagaaactacctcaccagactgccctgacctctgactttggcttgtttgggacaat 244
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 385 gcagtagaaactacctcaccagactgccctgacctctggctttggcttgtttgggacaat 444

                                                                       
Query: 245 gtgaggcactggcacacggcaaaggacagaggaggctgaggtcagagcttgataggtctc 304
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgaggcactggcacacggcaaagggcagaggaggctgaggtcagagcttgataggtctc 504

                    
Query: 305 ttccctgtg 313
           |||||||||
Sbjct: 505 ttccctgtg 513


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space:   218064
Effective search space used:   218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no163_b14.g1 MSMg01no163_b14.g1 CHROMAT_FILE:
MSMg01no163_b14.g1 PHD_FILE: MSMg01no163_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:37 2005
         (282 letters)



>mm_chr2_70604277_70604958
          Length = 682

 Score =  538 bits (278), Expect = e-157
 Identities = 281/282 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtctgggtaatcttgagtttgtctgtcggggacggacaaatgagatggtgctgcaggga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgtctgggtaatcttgagtttgtctgtcggggacggacaaatgagatggtgctgcaggga 423

                                                                       
Query: 61  gcagaagtagtggtaaagacccagaagtctctggcatgggtgctaataaaggcttaggtt 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gcagaagtagaggtaaagacccagaagtctctggcatgggtgctaataaaggcttaggtt 363

                                                                       
Query: 121 cagataaccacatcttaaagtgtagcctaagggctcctacagggttcctccctgaaacat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cagataaccacatcttaaagtgtagcctaagggctcctacagggttcctccctgaaacat 303

                                                                       
Query: 181 gcttcagagagttctttgtatctttgctaatgcgttcttttctttttcttaagagttttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcttcagagagttctttgtatctttgctaatgcgttcttttctttttcttaagagttttt 243

                                                     
Query: 241 agagaatttccagactttgtgacacatggtgcaatcacaccg 282
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agagaatttccagactttgtgacacatggtgcaatcacaccg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space:   183729
Effective search space used:   183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)