Query= MSMg01no164_b05.b1 MSMg01no164_b05.b1 CHROMAT_FILE:
MSMg01no164_b05.b1 PHD_FILE: MSMg01no164_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:49 2005
(312 letters)
>mm_chr2_160052048_160052755
Length = 708
Score = 520 bits (269), Expect = e-152
Identities = 298/309 (96%), Gaps = 4/309 (1%)
Strand = Plus / Minus
Query: 4 ggaattctgtgtagtttaacctttctcttggccattgttttgaccaactagaaagtgagt 63
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 508 ggaattctgtgtagtttaacctttctcttgggcattgttttgaccaactagaaagtgagt 449
Query: 64 tctgatgactcatggcacccccaacctgcaagtatctaaagagtaattcactgtagatga 123
||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 448 tctgatgactcatgg-acccccaacctgcaagtacctaaagagtacttcactgtagatga 390
Query: 124 tccagtctgtggggatggctgtgcagagtgtggctcacacccaaaccaagggctgtagtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tccagtctgtggggatggctgtgcagagtgtggctcacacccaaaccaagggctgtag-- 332
Query: 184 tttttttttttcttggcctcagccttcagtattgcttacaaacactggaaaaagaaaaga 243
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 331 -atttttttttcttggcctcagccttcagtattgcttacaaatactggaaaaagaagaga 273
Query: 244 gaccactttgaagtctacttctcggcatctattacaattacagcaatttataagttttga 303
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gaccactttgaagtctactactcggcatctattacaattacagcaatttataagttttga 213
Query: 304 aacttgagc 312
|||||||||
Sbjct: 212 aacttgagc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 708
Length adjustment: 9
Effective length of query: 303
Effective length of database: 699
Effective search space: 211797
Effective search space used: 211797
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_b05.g1 MSMg01no164_b05.g1 CHROMAT_FILE:
MSMg01no164_b05.g1 PHD_FILE: MSMg01no164_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:49 2005
(291 letters)
>mm_chr2_159937246_159937940
Length = 695
Score = 509 bits (263), Expect = e-148
Identities = 284/293 (96%), Gaps = 4/293 (1%)
Strand = Plus / Plus
Query: 1 ttcagtggtgaagcattctggtaaacggaaacatttgttaaggact----caacaggaaa 56
|||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 201 ttcagtggtgaagcattctggtaaactgaaacatttgttaaggactcaaacaacaggaaa 260
Query: 57 cacataagcacgtcccttgatccctgttgtagtccacatgtgatctgttgcacaaaattc 116
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 cacataagcacatcccttgatccctgctgtagtccacatgtgatctgttgcacaaaattc 320
Query: 117 aactcaacttggtttaaatggagtgccctagacaagacatcttgaagctgcatttatttt 176
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactcaacttggtttaaatggggtgccctagacaagacatcttgaagctgcatttatttt 380
Query: 177 ttatcttcctttgggttcaaggacatcattatccaagcctcaaatacttcttgctaacag 236
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaccttcctttgggttcaaggacatcattatccaagcctcaaatacttcttgctaacag 440
Query: 237 gatctttatatgcattcaacaaccctctacttttcccaccatgtctaatgcta 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatctttatatgcattcaacaaccctctacttttcccaccatgtctaatgcta 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 695
Length adjustment: 9
Effective length of query: 282
Effective length of database: 686
Effective search space: 193452
Effective search space used: 193452
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
