Query= MSMg01no165_a19.b1 MSMg01no165_a19.b1 CHROMAT_FILE:
MSMg01no165_a19.b1 PHD_FILE: MSMg01no165_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:04 2005
(279 letters)
>mm_chr2_118765338_118766016
Length = 679
Score = 516 bits (267), Expect = e-151
Identities = 273/275 (99%), Gaps = 2/275 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtcctgttg-tctagcaactccaggacatttcagccctttccagtcacagggt 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtcctgttgct-tagcaactccaggacatttcagccctttccagtcacagggt 263
Query: 64 gggtggagggggtgactagtatgagtggctaggtcctccttgctctggagggtctccaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gggtggagggggtgactagtatgagtggctaggtcctccttgctctggagggtctccaca 323
Query: 124 gggccagcaatctaacaaacagggaggttcttgcattaaggggagttctcctcctcctca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gggccagcaatctaacaaacagggaggttcttgcattaaggggagttctcctcctcctca 383
Query: 184 caaggggcaagcagtatcttcagggtccttccttccttttggcctgagagacacacagtg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caaggggcaagcagtatcttcagggtccttccttccttttggcctgagagacacacagtg 443
Query: 244 ctatggaatgtgggcttctcctggggagtgggggg 278
|||||||||||||||||||||||||||||||||||
Sbjct: 444 ctatggaatgtgggcttctcctggggagtgggggg 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no165_a19.g1 MSMg01no165_a19.g1 CHROMAT_FILE:
MSMg01no165_a19.g1 PHD_FILE: MSMg01no165_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:04 2005
(319 letters)
>mm_chr2_118907931_118908649
Length = 719
Score = 609 bits (315), Expect = e-179
Identities = 315/315 (100%)
Strand = Plus / Minus
Query: 1 agagatctacctgcctttgcttcctaagtacaaggatgagaaggcctatgccatcctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agagatctacctgcctttgcttcctaagtacaaggatgagaaggcctatgccatcctacc 399
Query: 61 aagtaatagatacaatcattttccccagaaaagatatcatgtagaccagaatggcctggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aagtaatagatacaatcattttccccagaaaagatatcatgtagaccagaatggcctggc 339
Query: 121 ttttttgtttcttgggcttatttatttattcatgtaaatacatctttgggcttggaggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttttttgtttcttgggcttatttatttattcatgtaaatacatctttgggcttggaggcc 279
Query: 181 aaataggcatgatgtggatattggaatcagagctcttatccttatgactttgaagcaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aaataggcatgatgtggatattggaatcagagctcttatccttatgactttgaagcaagt 219
Query: 241 gctcttaaccagggaaacacagccaaggatacacagagaaaccctgtcttattggtgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gctcttaaccagggaaacacagccaaggatacacagagaaaccctgtcttattggtgtgt 159
Query: 301 gtgtgtggggggggg 315
|||||||||||||||
Sbjct: 158 gtgtgtggggggggg 144
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
