Query= MSMg01no166_d14.b1 MSMg01no166_d14.b1 CHROMAT_FILE:
MSMg01no166_d14.b1 PHD_FILE: MSMg01no166_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:39 2005
(361 letters)
>mm_chr2_131762827_131763587
Length = 761
Score = 667 bits (345), Expect = 0.0
Identities = 354/357 (99%)
Strand = Plus / Minus
Query: 5 gaattccacgtgttgccgctctagctatcccaggtgggaggctgttttccagggcgccat 64
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaattccacgtgtggatgctctagctatcccaggtgggaggctgttttccagggcgccat 502
Query: 65 ccccaaacagtggcttctttggttgtagaaccctttgcctatgctaagttacatgtgtca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccccaaacagtggcttctttggttgtagaaccctttgcctatgctaagttacatgtgtca 442
Query: 125 ctgtcaccttgtactctgggtacaagtcaggggatacaccagtatttattcactagacca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtcaccttgtactctgggtacaagtcaggggatacaccagtatttattcactagacca 382
Query: 185 aaacaaagccccaactagccagcagttatttggtgttatattcttattggcccggtgtta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacaaagccccaactagccagcagttatttggtgttatattcttattggcccggtgtta 322
Query: 245 gcactggctgatgacagactccatcaaagggacctgaagcaaagagcaactggtctactg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcactggctgatgacagactccatcaaagggacctgaagcaaagagcaactggtctactg 262
Query: 305 tacatttcccagggcccatcagtgccaggggtattagcctatgggggacacagagaa 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacatttcccagggcccatcagtgccaggggtattagcctatgggggacacagagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_d14.g1 MSMg01no166_d14.g1 CHROMAT_FILE:
MSMg01no166_d14.g1 PHD_FILE: MSMg01no166_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:39 2005
(530 letters)
>mm_chr2_131593175_131594109
Length = 935
Score = 948 bits (490), Expect = 0.0
Identities = 521/534 (97%), Gaps = 5/534 (0%)
Strand = Plus / Plus
Query: 2 aaaaaaggaagagattttaatgtgtgatggacacatcttcctgtcttctgttgaggaagt 61
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 202 aaaaaaggaagagattttaatgtgtgatggacacgtcttcctgtcttctgttgaggaagt 261
Query: 62 tgagcttcagctgagttttagtattagcagggtacagg-----ccagtacaaattctaag 116
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 262 tgagcttcagctgagttttagtattagcagggtacaggacaggccagtacaaattctaag 321
Query: 117 agcagttattcctaatttcagaaaaggtaaaaagggtgtagtgtcaaaaaggcaagagac 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agcagttattcctaatttcagaaaaggtaaaaagggtgtagtgtcaaaaaggcaagagac 381
Query: 177 tggactctatgacagacctagggaacgaagtatggttggacaggaagtcaaggcaccaag 236
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 382 tggactctatgacagacctagggaaggaagtatggttggacaggaagtcaaggcaccaag 441
Query: 237 ggaaggtttttgtcctggttagcattaactaagagctcggtgcagccaacatttaagttg 296
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggaagggtggtgtcctggttagcattaactaagagctcggtgcagccaacatttaagttg 501
Query: 297 gtgtggcccaacacagcctaggagcaaaaagaatcctgatggaggaattctctttatcac 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtgtggcccaacacagcctaggagcaaaaagaatcctgatggaggaattctctttatcac 561
Query: 357 gttggtctgtggaggtatctgagagggatggtcttgcctgtcttaattgatgtaagaggg 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 562 gttggtctgtggaggtatctgagagggatggtcttgcctgtcttaattgatgtaagagag 621
Query: 417 cccaacacttccaggacatccctagtcagtgggtctaggctatgcaaggataacgggcag 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 622 cccaacacttccaggacatccctagtcagtgggtctaggctatgcaaggataacaggcag 681
Query: 477 atgagattgtccactgtactgtttctttcttcagattctcaagcattacttggc 530
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 682 atgagattgtccactgtactgtttctttcttcagattcgcaagcattacttggc 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 935
Length adjustment: 10
Effective length of query: 520
Effective length of database: 925
Effective search space: 481000
Effective search space used: 481000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
