Query= MSMg01no166_j13.b1 MSMg01no166_j13.b1 CHROMAT_FILE:
MSMg01no166_j13.b1 PHD_FILE: MSMg01no166_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:08 2005
(316 letters)
>mm_chr2_143512734_143513448
Length = 715
Score = 574 bits (297), Expect = e-168
Identities = 309/313 (98%), Gaps = 1/313 (0%)
Strand = Plus / Minus
Query: 4 ggaattcattgcccactaattgaaattttatttgtaagcaatctttatgctcaagcacat 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggaattcattg-ccactaattgaaattttatttgtaagcaatctttatgctcaagcacat 457
Query: 64 gtgttttctttagcgaatggaagagtatcctatgtaggacctcatctattgtctaagaac 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 456 gtgttttctttagcgaatggaagagtatcctatgtaggacctcatctattgtctaagagc 397
Query: 124 atttacttgtggttattgagatcaaccacacattggtgatgatcatattgctaagtgggg 183
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atttacttgtggttattgagagcaaccacacattggtgatgatcatattgctaagtgggg 337
Query: 184 tcagttcacaagtcggtgagtgcaaagctaaaatagtcagagctaacacggaaagagtgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tcagttcacaagtcggtgagtgcaaagctaaaatagtcagagctaacacggaaagagtgg 277
Query: 244 agagagatttattacctggcatatgcaaggcgagcataggagttgttttcaaagcagcac 303
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 276 agagagatttattacctggcataggcaaggcgagcataggagttgttttcaaagcagcac 217
Query: 304 tctttctccctca 316
|||||||||||||
Sbjct: 216 tctttctccctca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 715
Length adjustment: 9
Effective length of query: 307
Effective length of database: 706
Effective search space: 216742
Effective search space used: 216742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_j13.g1 MSMg01no166_j13.g1 CHROMAT_FILE:
MSMg01no166_j13.g1 PHD_FILE: MSMg01no166_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:09 2005
(204 letters)
>mm_chr2_143370233_143370836
Length = 604
Score = 381 bits (197), Expect = e-110
Identities = 200/201 (99%)
Strand = Plus / Plus
Query: 1 tcaaaattgaagatgtggtatgctgaagactacagctggatagaacccatccgcagagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaaattgaagatgtggtatgctgaagactacagctggatagaacccatccgcagagct 260
Query: 61 tgcttatacttctctagcaatgctggggagtagctaagtcagtgaagacgatgtgccttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcttatacttctctagcaatgctggggagtagctaagtcagtgaagacgatgtgccttg 320
Query: 121 tacagtaagcattctcctgtccaccattcctgtgtctcctgtctacactgtgattttgtg 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 tacagtaagcattctcctgtccaccattcctgtgtctcctgtatacactgtgattttgtg 380
Query: 181 ctaaggaggagagtggggtgg 201
|||||||||||||||||||||
Sbjct: 381 ctaaggaggagagtggggtgg 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
