Query= MSMg01no167_e21.b1 MSMg01no167_e21.b1 CHROMAT_FILE:
MSMg01no167_e21.b1 PHD_FILE: MSMg01no167_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:02 2005
(553 letters)
>mm_chr2_39449828_39450783
Length = 956
Score = 967 bits (500), Expect = 0.0
Identities = 538/552 (97%), Gaps = 3/552 (0%)
Strand = Plus / Minus
Query: 5 ggaattcaaagtttttcacagacagaaaagtcaaaaacatgaaaccaaaaagtgtgtgcg 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ggaattcaaagtttttcaaagacagaaaagtcaaaaacatgaaaccaaaaagtgtgtgcg 697
Query: 65 tatcttaatgctacaatttaatcttcattaaaattttaaaacttttgattggcattgatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tatcttaatgctacaatttaatcttcattaaaattttaaaacttttgattggcattgatt 637
Query: 125 ttgtgtcagcttttaccttgccaatggtgtcacagggattctgataaaatgactattctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ttgtgtcagcttttaccttgccaatggtgtcacagggattctgataaaatgactattctg 577
Query: 185 ataaaatgactaactctcacaggtctcctgttttctgcttgcttttttttttt---ctta 241
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 576 ataaaatgactaactctcacaggtctcctattttctgcttgcttttttttttttttctta 517
Query: 242 ttatgaaagacataaaacaagagacattgattagggaattgaagttctcccatgaaagat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ttatgaaagacataaaacaagagacattgattagggaattgaagttctcccatgaaagat 457
Query: 302 gagcatgtcgacaaaaataccaccagctccccagcacacaggtcaagcatctcttaatct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gagcatgtcgacaaaaataccaccagctccccagcacacaggtcaagcatctcttaatct 397
Query: 362 cacgtttttcaaggcactgcctgatgagttaatatttcctgctctgggaatcagacctgt 421
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cacgtttttcaagggattgcctgatgagttaatatttcctgctctgggaatcagacctgt 337
Query: 422 tgaaattttgaaacaacttgagaatcaaaaaactgcagtgcctcctgcagacacagagtc 481
||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 336 tgaaattttgagacaaagagagaatcaaaaaactgcagtgcctcccacagacacagagtc 277
Query: 482 atgcctggctgtatcttcaataccacatgaactatattttgaatttgttgtctgacattt 541
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atgcctggctgtatcttcaacaccacatgaactatattttgaatttgttgtctgacattt 217
Query: 542 aaggaggtcagg 553
||||||||||||
Sbjct: 216 aaggaggtcagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 956
Length adjustment: 10
Effective length of query: 543
Effective length of database: 946
Effective search space: 513678
Effective search space used: 513678
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_e21.g1 MSMg01no167_e21.g1 CHROMAT_FILE:
MSMg01no167_e21.g1 PHD_FILE: MSMg01no167_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:02 2005
(553 letters)
>mm_chr2_39306248_39307200
Length = 953
Score = 1036 bits (536), Expect = 0.0
Identities = 548/552 (99%)
Strand = Plus / Plus
Query: 1 cccacccctaagccctttaccccataaaaacccctagctttcgagcctcggggtcgaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccacccctaagccctttaccccataaaaacccctagctttcgagcctcggggtcgaaac 260
Query: 61 cactgtctcctgtgtgagatacgtttcgacccagagctctgccattaaactgcctcgtgt 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 cactgtctcctgtgtgagatacgtttcgacccagagctccgccattaaactgcctcgtgt 320
Query: 121 gtttgcagcaagaagaattctcgtgtttctttgggtgcgctctctctcttgagactagag 180
||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gtttgcagcaagaaggattctcgtgtttctttgggtgcgctctctctcccgagactagag 380
Query: 181 tgggggtccccgaaagggggtcttacagaatatctaaaatcatagttgtttgtcctagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggggtccccgaaagggggtcttacagaatatctaaaatcatagttgtttgtcctagaa 440
Query: 241 caaaccagtgacaacaatcatatatgctgctctattttgttctctcactaattctttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaaccagtgacaacaatcatatatgctgctctattttgttctctcactaattctttcaa 500
Query: 301 tataaaactcaaggttgtacaaatttaaaaaaaaagtatcaaattcccaatctggcctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tataaaactcaaggttgtacaaatttaaaaaaaaagtatcaaattcccaatctggcctta 560
Query: 361 tatgtacttgtcaatataaagatagtagtttgctcatccaaaccaggtacacatcaagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgtacttgtcaatataaagatagtagtttgctcatccaaaccaggtacacatcaagta 620
Query: 421 attgatcctaggaacctttgcacactgagttttaagtgctttgtgttttaacatagacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attgatcctaggaacctttgcacactgagttttaagtgctttgtgttttaacatagacaa 680
Query: 481 ttatcatgacaaccttttgattttttactttttaatgatgtctttattgcaacatgacct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatcatgacaaccttttgattttttactttttaatgatgtctttattgcaacatgacct 740
Query: 541 ccactttcaatg 552
||||||||||||
Sbjct: 741 ccactttcaatg 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
