Query= MSMg01no171_e03.b1 MSMg01no171_e03.b1 CHROMAT_FILE:
MSMg01no171_e03.b1 PHD_FILE: MSMg01no171_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:26 2005
(679 letters)
>mm_chr2_40636785_40637863
Length = 1079
Score = 1218 bits (630), Expect = 0.0
Identities = 663/674 (98%), Gaps = 1/674 (0%)
Strand = Plus / Minus
Query: 5 gaattctatgagtccttcaaagaagagctaatatcaatacttcttaaataattccacaaa 64
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 973 gaattctatgagaccttcaaagaagagctaatatcaatactccttaaataattccacaaa 914
Query: 65 acagaaacagaaggaacactacctaattcattctttgaatccacagttactctgataccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 acagaaacagaaggaacactacctaattcattctttgaatccacagttactctgataccc 854
Query: 125 aaaccacataaagacccaacaaagaaagagaatttcagataaatctcgcttacaaattta 184
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 853 aaaccacataaagacccaacaaagaaagataatttcagataaatctcgcttacaaa-tta 795
Query: 185 tggaaaaacaacaataaaagacaaaatagccaaaacaattctcaacaattaataacttca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tggaaaaacaacaataaaagacaaaatagccaaaacaattctcaacaattaataacttca 735
Query: 245 tggggaatcaccaaccctgacctcaaactggatttacttcttgatatggtaaaagaaatt 304
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 734 gggggaatcaccaaccctgacctcaagctggatttacttcttgatatggtaaaagaaatt 675
Query: 305 actagtatcatattttggttcaatctacatattcattgatttccatcatcttacaagtgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 actagtatcatattttggttcaatctacatattcattgatttccatcatcttacaagtgg 615
Query: 365 acggtgttcacatacatgttggtgaattaataccatctggatttctaggttacaatagaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 acggtgttcacatacatgttggtgaattaataccatctggatttctaggttacaatagaa 555
Query: 425 gaaaggactaaaagtaccaagtacccagttccacatgccatacattactgcagcaaagat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gaaaggactaaaagtaccaagtacccagttccacatgccatacattactgcagcaaagat 495
Query: 485 cattaatgtctgcatgttgcagggtcttcaatcacattgtgaactaaacattatgaactg 544
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 494 cattaatgtctgcatgttgcaggatcttcaatcacattgtgaactaaacattatgaactg 435
Query: 545 aaaaaccttgttgtgttttggctcagacataccacatatattttttccaagagctttctg 604
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 434 aaaaaccttgttgtgttttggctcagacataccacatataatttttccaagagctttctg 375
Query: 605 tttattctaaataattactctgctgtggctcagctctagctgacacctttaattcaaaaa 664
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 374 tttattctaaataattactctgctgtggctcagctctagcttatacctttaattcaaaaa 315
Query: 665 ctagataaattcaa 678
||| ||||||||||
Sbjct: 314 ctaaataaattcaa 301
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_e03.g1 MSMg01no171_e03.g1 CHROMAT_FILE:
MSMg01no171_e03.g1 PHD_FILE: MSMg01no171_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:26 2005
(286 letters)
>mm_chr2_40471541_40472226
Length = 686
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%)
Strand = Plus / Plus
Query: 1 atatgaactgtcactttgaagaaatgtggtctagagtcacctactttaggagaacttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatgaactgtcactttgaagaaatgtggtctagagtcacctactttaggagaacttcaa 260
Query: 61 aacaatataacaaggttaataaatgctttttttcttttcatcaaatttaaaggtcaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaatataacaaggttaataaatgctttttttcttttcatcaaatttaaaggtcaaggg 320
Query: 121 acttttctggacacagtgaaatgcaaaggtgaaccttaaaacaattgaaactctatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttttctggacacagtgaaatgcaaaggtgaaccttaaaacaattgaaactctatttct 380
Query: 181 ctcattgtatgtgtgaacatttctattttaggcatgacaatagacactcaaaagggaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcattgtatgtgtgaacatttctattttaggcatgacaatagacactcaaaagggaaaa 440
Query: 241 aaatgtcctaaaagtctctatttttctccatatagaaattaatgaa 286
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatatcctaaaagtctctatttttctccatatagaaattaatgaa 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
