Query= MSMg01no173_j01.b1 MSMg01no173_j01.b1 CHROMAT_FILE:
MSMg01no173_j01.b1 PHD_FILE: MSMg01no173_j01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:16 2005
(317 letters)
>mm_chr2_34612502_34613218
Length = 717
Score = 516 bits (267), Expect = e-151
Identities = 302/323 (93%), Gaps = 16/323 (4%)
Strand = Plus / Plus
Query: 5 gaattctatccaaagacatttttttttctgatacacaactccaccaaccacactatacag 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gaattctatccaaaggcatttttttttctgatacacaactccaccaaccacactatacag 250
Query: 65 gcatatacaattatttgtgcacagtcacaaattcttactgaatcgtgctaggcatggtgg 124
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gcatat-caattatttgtgcacagtcacaaattcttactgaatcgtgctaggcatggtgg 309
Query: 125 tacatacaggtaatgtcagggtttaggaggctgaggcaggagaatcacaatttgacgcca 184
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 310 tacatacaggtaatgtcagtgtttaggaggctgagacaggagaatcacaatttgacgcca 369
Query: 185 gccta---------------ccttgtctcaactgaccacagcagtgccaattcctatcgg 229
||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 370 gcctagcctggagagcaagaccttgtctcaactgaccacagcagtgccaattcctattgg 429
Query: 230 atcttcatgaaaggtaagctgttctgactcccaattctgtgctgctcattaaagctctgt 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 430 atcttcatgaaaggtaagctgttctgactcccaattctgtgctgctcattaaagctctct 489
Query: 290 gcttcaaaagcacacaccagtga 312
|||||||||||||||||||||||
Sbjct: 490 gcttcaaaagcacacaccagtga 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_j01.g1 MSMg01no173_j01.g1 CHROMAT_FILE:
MSMg01no173_j01.g1 PHD_FILE: MSMg01no173_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:16 2005
(331 letters)
>mm_chr2_34779485_34780215
Length = 731
Score = 530 bits (274), Expect = e-155
Identities = 309/332 (93%), Gaps = 20/332 (6%)
Strand = Plus / Minus
Query: 1 gcctggttgctggtaagcgagagcctcca-ggcttgcactctgagcacagctcttcattc 59
||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 570 gcctggttgctggtaagcgagagcctccatggct---------agcac----------tc 530
Query: 60 tgttacagagctggagaaaatgagcacttcctgtggtgtcgtggacacctctggatgctg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tgttacagagctggagaaaatgagcacttcctgtggtgtcgtggacacctctggatgctg 470
Query: 120 cgaaagccctggcacagcctctcttaccaaggtctagggaataccatacaataggcccaa 179
| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 469 caaaagccctggtacagcctctcttaccaaggtctagggaataccatacaatagacccaa 410
Query: 180 caggtgtgaccatatgacaggctcaataggtgtgagtctgccaatgccctaagggaccag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 caggtgtgaccatatgacaggctcaataggtgtgagtctgccaatgccctaagggaccag 350
Query: 240 gcagagtctctcatctgtggctatgaggctctagatctccccaaagttttctctggtaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gcagagtctctcatctgtggctatgaggctctagatctccccaaagttttctctggtaca 290
Query: 300 tctgttcccatctggacccttctggcctttga 331
||||||||||||||||||||||||||||||||
Sbjct: 289 tctgttcccatctggacccttctggcctttga 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
