Query= MSMg01no174_c04.b1 MSMg01no174_c04.b1 CHROMAT_FILE:
MSMg01no174_c04.b1 PHD_FILE: MSMg01no174_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:56 2005
(171 letters)
>mm_chr2_33133513_33134085
Length = 573
Score = 281 bits (145), Expect = 2e-80
Identities = 164/171 (95%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 3 cggaattcccacggcacagagaaaccagttcccagagcctgccatcctcacctccattgt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cggaattcccacggcacagagaaaccagttcccagagcctgccatcctcacctccattgt 262
Query: 63 ccactgccagcac--gtccttccgcactacttcagactgcttatccagcttctagagcac 120
||||||||||||| ||||||| |||||||||||| |||||||||||||||| |||| ||
Sbjct: 263 ccactgccagcacatgtccttcagcactacttcaggctgcttatccagcttcaagagaac 322
Query: 121 gatatacactcctatacagtcccatcttcagaatcacgccccatgtgactg 171
|||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 323 gatatacactcctatacagttccatcttcagaatcacgccccatgtgactg 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 573
Length adjustment: 8
Effective length of query: 163
Effective length of database: 565
Effective search space: 92095
Effective search space used: 92095
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no174_c04.g1 MSMg01no174_c04.g1 CHROMAT_FILE:
MSMg01no174_c04.g1 PHD_FILE: MSMg01no174_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:56 2005
(198 letters)
>mm_chr2_33324863_33325458
Length = 596
Score = 333 bits (172), Expect = 5e-96
Identities = 192/200 (96%), Gaps = 4/200 (2%)
Strand = Plus / Minus
Query: 1 aggtccttaagttgcaatgctttgtaaaggatttaccaactgagccattcccccaatccc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 350 aggtccttaagttgcaatgctttgtaaaggatttaccaactgagccattcccttaatccc 291
Query: 61 cacgttttttttcccctagcaagatgttccgcacctgttcccagttctgtgcttcagtat 120
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cacg--ttttttcccctagcaagatgttccgcacctgttcccagttctgtgcttcagtat 233
Query: 121 ttgttttctttcgttttgtttccccgaacttctaaaaaaaaa--tttttttttaatgcgt 178
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 232 ttgttttctttcgttttgtttccccgaacttctaaaaaaaaatttttttttttaatgtgt 173
Query: 179 atgtgcgttttgcctgcaca 198
||||| ||||||||||||||
Sbjct: 172 atgtgtgttttgcctgcaca 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 596
Length adjustment: 8
Effective length of query: 190
Effective length of database: 588
Effective search space: 111720
Effective search space used: 111720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
