Query= MSMg01no175_e23.b1 MSMg01no175_e23.b1 CHROMAT_FILE:
MSMg01no175_e23.b1 PHD_FILE: MSMg01no175_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:22 2005
(322 letters)
>mm_chr2_73510299_73511020
Length = 722
Score = 601 bits (311), Expect = e-176
Identities = 314/315 (99%)
Strand = Plus / Minus
Query: 5 gaattccactgaatctgaggccatcctatgctacatagtgagttccaagccagtataggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gaattccactgaatctgaggccatcctatgctacatagtgagttccaagccagtataggc 471
Query: 65 tacagtgtaagcctctgccacaaaacatagacaatcgaagagaatgctgttgctttgcct 124
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 470 tacagtgtaagcctctgccacaaaacatagacaatcgaaaagaatgctgttgctttgcct 411
Query: 125 ttctgtaaatctctctagactctacatagcactaagggtaaagaggttctcagaaatagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttctgtaaatctctctagactctacatagcactaagggtaaagaggttctcagaaatagt 351
Query: 185 tctgcactcattctatggtgacacattgtttagactggagtataagaaggaaatctgacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tctgcactcattctatggtgacacattgtttagactggagtataagaaggaaatctgacc 291
Query: 245 ttatgcagttggataggtatttagtagctttttcagataatagtgcatgattctctttga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttatgcagttggataggtatttagtagctttttcagataatagtgcatgattctctttga 231
Query: 305 tacaatgccataata 319
|||||||||||||||
Sbjct: 230 tacaatgccataata 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_e23.g1 MSMg01no175_e23.g1 CHROMAT_FILE:
MSMg01no175_e23.g1 PHD_FILE: MSMg01no175_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:22 2005
(343 letters)
>mm_chr2_73328818_73329560
Length = 743
Score = 538 bits (278), Expect = e-157
Identities = 317/338 (93%), Gaps = 15/338 (4%)
Strand = Plus / Plus
Query: 1 aactgagaaaagcagccagaagtctgactttcctaatggacaactaagaagtcagaggac 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 aactgagaaaagcagccagaagtctgactttcctaatggacagctaagaagtcagaggac 260
Query: 61 ttggaccctgtaaatttctcatttctgaaaatgaggtagttgtcaatcttttaaacattg 120
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 ttggaccctgtaaacttctcatttctgaaaatgaagtagttgtcaatcttttaaacattg 320
Query: 121 gtatgactagggatgggaggaaggaattctggccacaaaatgcatgtgttggttgtacag 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatgactaggggtgggaggaaggaattctggccacaaaatgcatgtgttggttgtacag 380
Query: 181 cagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtacattttacatttacaatgt 240
|||||||||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 381 cagtgtgtgtatgtgtgtgtgtgtgtgtgtg------c--acattttacatttacaatgt 432
Query: 241 atgcttttgagtaacagctaacatttaaattccatacttaatttttcacagactggagcg 300
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 433 atgcatttgagtaaca-------tttaaattccatacttaatttttcacagactggagcg 485
Query: 301 acagtaaagaaggaagagggatagagatctaggaacaa 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 486 acagtaaagaaggaagagggatagagatctaggaacaa 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
