Query= MSMg01no177_e08.b1 MSMg01no177_e08.b1 CHROMAT_FILE:
MSMg01no177_e08.b1 PHD_FILE: MSMg01no177_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:48 2005
(544 letters)
>mm_chr2_148425056_148425999
Length = 944
Score = 1029 bits (532), Expect = 0.0
Identities = 538/540 (99%)
Strand = Plus / Plus
Query: 5 gaattccagattccgctagagttctggctaagccattgtcactttagatatgtggaaaat 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagattctgctagagttctggctaagccattgtcactttagatatgtggaaaat 264
Query: 65 tcacttacaaaacagaccacatttgacagtttgtgatttccaccaggaagtgactcaact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcacttacaaaacagaccacatttgacagtttgtgatttccaccaggaagtgactcaact 324
Query: 125 tcccccaaacaccagaagtctccactggggaagggaaagcaacctgtcaatgttagggaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcccccaaacaccagaagtctccactggggaagggaaagcaacctgtcaatgttagggaa 384
Query: 185 ccagctggttgctttataattcaccagctgctatataatttatgcatttgcacaatgtac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccagctggttgctttataattcaccagctgctatataatttatgcatttgcacaatgtac 444
Query: 245 tctgctagtcttgctgagagatggctaacaggataggaatttacagcatgaaggatcctc 304
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 445 tctgctagtcttgctgagagatggctaacaggataggaatttatagcatgaaggatcctc 504
Query: 305 ctaagagtcctgcaaactggatgaaaatagatcctgaccaaacacagaatttccattctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctaagagtcctgcaaactggatgaaaatagatcctgaccaaacacagaatttccattctt 564
Query: 365 gaaagaaaacaaaaatgcttaatatcaaagtccaaggttcatgtgacatcagagttctct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaaagaaaacaaaaatgcttaatatcaaagtccaaggttcatgtgacatcagagttctct 624
Query: 425 atagccacactggaaggaacaaaatatcatcatgttcttgattccaaaaacaaatagtta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atagccacactggaaggaacaaaatatcatcatgttcttgattccaaaaacaaatagtta 684
Query: 485 gaatctacttctcttatttgaggatgtcattctcttatttaatttacacttctataacaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaatctacttctcttatttgaggatgtcattctcttatttaatttacacttctataacaa 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_e08.g1 MSMg01no177_e08.g1 CHROMAT_FILE:
MSMg01no177_e08.g1 PHD_FILE: MSMg01no177_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:48 2005
(241 letters)
>mm_chr2_148557060_148557699
Length = 640
Score = 412 bits (213), Expect = e-119
Identities = 234/241 (97%), Gaps = 1/241 (0%)
Strand = Plus / Minus
Query: 1 acctggagtttggcagcagctggtggctcctggggagcgcgaagcctgcgcccctgtatc 60
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 440 acctggagtttggcagcagctggtggctcgtggggagcgcgaagtctgcgcccctgtatc 381
Query: 61 ctgggcacttgcccgctggccttggcccaagggccttgaaatcatatcctccttggtgtg 120
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 380 ccgggcacttgcccgctggccttggctcaagggccttgaaatcatatcctccttggtgtg 321
Query: 121 tttttcatttgccagagtgacttttatccgtagttcaggcttcccgtttgatgaactgta 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttttcatttgccagagtgacttgtatccgtagttcaggcttcccgtttgatgaactgta 261
Query: 181 tgtaacattgctcctttttaaagtcagagtatcctttgggaatcccgcgattttgtataa 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 260 tgtaacattgctcctttttaaagtcagagtatcctttgggaatcccgtgattttgt-taa 202
Query: 241 t 241
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 640
Length adjustment: 9
Effective length of query: 232
Effective length of database: 631
Effective search space: 146392
Effective search space used: 146392
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
