Query= MSMg01no177_i19.b1 MSMg01no177_i19.b1 CHROMAT_FILE:
MSMg01no177_i19.b1 PHD_FILE: MSMg01no177_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:08 2005
(598 letters)
>mm_chr2_73418717_73419714
Length = 998
Score = 766 bits (396), Expect = 0.0
Identities = 408/412 (99%)
Strand = Plus / Minus
Query: 4 ggaattctcctgcctccaattcaacactggctacttctttcaaactcatgcaggcacaaa 63
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggaattctccagcatccaattcaacactggctacttctttcaaactcatgcaggcacaaa 353
Query: 64 agatgtcacaggcctatgacacagaatttcattccatgtctagggagagtacacttgcgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agatgtcacaggcctatgacacagaatttcattccatgtctagggagagtacacttgcgt 293
Query: 124 ggttaaggacagttgcacagtggtgtctactcaaatccgtagcctccactgaaatcatgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggttaaggacagttgcacagtggtgtctactcaaatccgtagcctccactgaaatcatgc 233
Query: 184 tcaaagtattttgctaataattgattcatgggcctgcgagatgactcagcgggtgaagga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tcaaagtattttgctaataattgattcatgggcctgcgagatgactcagcgggtgaagga 173
Query: 244 gcttgccaccaagtctgataacctgagtttgatccccagggcacacacagtaggagaacc 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 acttgccaccaagtctgataacctgagtttgatccccagggcacacacagtaggagaacc 113
Query: 304 aacttctgaagactctctctattctacataggcaccatggcataccaccaccaccctcac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 aacttctgaagactctctctattctacataggcaccatggcataccaccaccaccctcac 53
Query: 364 atacagcaaattaattaattaattaaaacccctatatacaagactaggggtt 415
||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 ataaagcaaattaattaattaattaaaacccctatatacaagactaggggtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_i19.g1 MSMg01no177_i19.g1 CHROMAT_FILE:
MSMg01no177_i19.g1 PHD_FILE: MSMg01no177_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:08 2005
(242 letters)
>mm_chr2_73265589_73266230
Length = 642
Score = 424 bits (219), Expect = e-123
Identities = 237/243 (97%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 1 ttccct-tactacagcctgtgtacgctgtgggagtagcagaatgatatacagccaactgt 59
|||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccctct-ctacagcctgtgtacactgtgggagtagcagaatgatatacagccaactgt 259
Query: 60 tactgagcaccaggtatgcactgttttctctgatgtttgtgtatggattgttgtaagcac 119
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tactgagcaccaggtatgcgctgttttctctgatgtttgtgtatggattgttgtaagcac 319
Query: 120 tgtacactggatgaaggcagtgcagagggcttcaataacccatccatggcctcacagagg 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgtacactggacgaaggcagtgcagagggcttcaataacccatccatggcctcacagagg 379
Query: 180 aagcgcccaagtcagtatccaaacctgtgtgtgtgtgtttgtgtatggtgtgtatgtata 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 380 aagcgcccaagtcagtatccaaacctgtgtgtgtgtgtttgtgtatggtgtgtatgtaca 439
Query: 240 tgt 242
|||
Sbjct: 440 tgt 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
