Query= MSMg01no178_g20.b1 MSMg01no178_g20.b1 CHROMAT_FILE:
MSMg01no178_g20.b1 PHD_FILE: MSMg01no178_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:14 2005
(621 letters)
>mm_chr2_114028759_114029779
Length = 1021
Score = 1125 bits (582), Expect = 0.0
Identities = 594/598 (99%), Gaps = 1/598 (0%)
Strand = Plus / Minus
Query: 24 ggcagggagattcactggggaagaggtgacaagtcagacacatggtacctgagcacaggt 83
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ggcagggagattcact-gggaagaggtgacaagtcagacacatggtacctgagcacaggt 963
Query: 84 aaccagccatgtggcaaaatgtaggcgagaataaatgggatattctagttagggaagagc 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 aaccagccatgtggcaaaatgtaggcgagaataaatgggatattctagttagggaagagc 903
Query: 144 ctagctatatggccaaggtgtttgtaaatatattttgagtctgagttttatttgtgggca 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ctagctatatggccaaggtgtttgtaaatatattttgagtctgagttttatttgtgggca 843
Query: 204 catgggactgggaagaagaactggtgccattcttcaatagtgccaacctagaaacattga 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 catgggactgggaagaagaactggtgccattcttcaatagtgccaacctagaaacattga 783
Query: 264 ggagggaaaactgaggaagatcgtattatgcctgtcccactaagggagctgaggtaccct 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ggagggaaaactgaggaagatcgtattatgcctgtcccactaagggagctgaggtaccct 723
Query: 324 actgtttggatgaaaaagagatctattgtctcttctggtcttgtgttacccgggctaagg 383
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 722 actgtttggatgaaaaagagatctattgtctcttctggtcttgtgttacttgggctaagg 663
Query: 384 gctaagagccctatagagctgatgagtacttagacacaaaatttgaaagaaatcttagtt 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gctaagagccctatagagctgatgagtacttagacacaaaatttgaaagaaatcttagtt 603
Query: 444 gtaagatagcctgcacttgcaacctggtcaccatcaccttgaagagacgagacttgcttc 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gtaagatagcctgcacttgcaacctggtcaccatcaccttgaagagacgagacttgcttc 543
Query: 504 ccccttatgcctactggggacttagaacatacctgacacgccaagatctaggaaccatgt 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ccccttatgcctactggggacttagaacatacctgacacgccaagatctaggaaccatgt 483
Query: 564 tcaccattcaaaggtaaagcaaagcatctctttttaaatccataggacctttggtgaa 621
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcaccattcaaaggtaaggcaaagcatctctttttaaatccataggacctttggtgaa 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_g20.g1 MSMg01no178_g20.g1 CHROMAT_FILE:
MSMg01no178_g20.g1 PHD_FILE: MSMg01no178_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:14 2005
(623 letters)
>mm_chr2_113859340_113860361
Length = 1022
Score = 1127 bits (583), Expect = 0.0
Identities = 613/623 (98%), Gaps = 1/623 (0%)
Strand = Plus / Plus
Query: 1 agtgaagagagtatgtcttcaggaggcaatagtaggctgagataactaagaaccctctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgaagagagtatgtcttcaggaggcaatagtaggctgagataactaagaaccctctga 260
Query: 61 ccatgaggcctatgaaccctgcctagggggcactcactaccatgacttcagccttgttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatgaggcctatgaaccctgcctagggggcactcactaccatgacttcagccttgttgc 320
Query: 121 ctaaggatcaagcggaaccccgtgcagctctcccaagtaacaacctccccacaagaaact 180
|||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||| ||
Sbjct: 321 ctaaggatcaagtggaaccctgtgcagttctcccaagtaacaacctccccacaagaagct 380
Query: 181 atccctgactacaaccaccacatcatggactttccacgaatttctgagggcttgcacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atccctgactacaaccaccacatcatggactttccacgaatttctgagggcttgcacctg 440
Query: 241 tactcagagactgcatctatctctagctgagctaggaccacttttgttacatcgttgaca 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tactcagaggctgcatctatctctagctgagctaggaccacttttgttacatcgttgaca 500
Query: 301 catcaacacagagtgaccctaagactgaactccaagaaccattcatctgatccaaagcct 360
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 501 catcaacacagagtgaccctaagattgaactcca-gaaccattcatctgatccaaagcct 559
Query: 361 gacgaactgtgctaagagcaactcggtatccaagggtctactcaacaaaagtgggataca 420
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 560 gacaaactgtgctaagagcaactcagtatccaagggtctactcaacaaaagtgggataca 619
Query: 421 tatccatttcagaatcactacctgaccccagatgtctcacttccattacaaaaacacaaa 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 620 tatccatttcagaatcactacctgaccccagatgtctcgcttccattacaaaaacacaaa 679
Query: 481 caacacaaataaccaagagagtgtgtctcctccaggaatcagcagcctcatagccatgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 caacacaaataaccaagagagtgtgtctcctccaggaatcagcagcctcatagccatgtt 739
Query: 541 cctcaagaaaaagaacttagatgacatatgaaacaattatttcaaaatagccattataaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cctcaagaaaaagaacttagatgacatatgaaacaattatttcaaaatagccattataaa 799
Query: 601 tatatatgagttacccggatagg 623
|||||||||||||||||||||||
Sbjct: 800 tatatatgagttacccggatagg 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1022
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1012
Effective search space: 620356
Effective search space used: 620356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
