Query= MSMg01no179_m15.b1 MSMg01no179_m15.b1 CHROMAT_FILE:
MSMg01no179_m15.b1 PHD_FILE: MSMg01no179_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:53 2005
(236 letters)
>mm_chr2_180336456_180337091
Length = 636
Score = 427 bits (221), Expect = e-124
Identities = 227/229 (99%)
Strand = Plus / Plus
Query: 5 gaattcctcattccctcgcaaaccagctctctcttcccactgttcctgagagcagagctg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcattccctagcaaaccagctctctcttcccactgttcctgagagcagagctg 264
Query: 65 tttccttctcctcaggagaggtggttgtaagcacagagcaccccagagagcaagaggggt 124
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 265 tttccttctcctcaggagaggtggttgtgagcacagagcaccccagagagcaagaggggt 324
Query: 125 gggtggggcacaaggacagagctagcaagggaactcagatgtgtggaacacctgaatgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggtggggcacaaggacagagctagcaagggaactcagatgtgtggaacacctgaatgaa 384
Query: 185 agcagctagctggtggccagctgggctgctacttgcttagcctggggtg 233
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcagctagctggtggccagctgggctgctacttgcttagcctggggtg 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no179_m15.g1 MSMg01no179_m15.g1 CHROMAT_FILE:
MSMg01no179_m15.g1 PHD_FILE: MSMg01no179_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:53 2005
(274 letters)
>mm_chr2_180413423_180414096
Length = 674
Score = 509 bits (263), Expect = e-149
Identities = 272/275 (98%), Gaps = 2/275 (0%)
Strand = Plus / Minus
Query: 1 agcacctggccttgtttcaaggtgctgcttgatcactgtcttcaaaaaaagcaactcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 agcacctggccttgtttcaaggtgctgcttgatcactgtcttcaaaaaaagcaactcccc 415
Query: 61 ttaggcttctggaggtgagatacctgcatggggccagcctgccctcctaagagc-agcca 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 414 ttaggcttctggaggtgagatacctgcatggggccagcctgccctcctaaga-ctagcca 356
Query: 120 tcaggcagcgtgactgtgatgggtgggactataggtgtggacccctaccctgcacctgga 179
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcaggcagcgtgactgggatgggtgggactataggtgtggacccctaccctgcacctgga 296
Query: 180 tcctgtttcaacttcatgcagttgtggggttctaccttgggggtacatgagcagggtttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tcctgtttcaacttcatgcagttgtggggttctaccttgggggtacatgagcagggtttg 236
Query: 240 ttcccctaatgcctttctctttcctgcctttgtgg 274
|||||||||||||||||||||||||||||||||||
Sbjct: 235 ttcccctaatgcctttctctttcctgcctttgtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
