Query= MSMg01no180_c07.b1 MSMg01no180_c07.b1 CHROMAT_FILE:
MSMg01no180_c07.b1 PHD_FILE: MSMg01no180_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:19 2005
(475 letters)
>mm_chr2_143272299_143273172
Length = 874
Score = 855 bits (442), Expect = 0.0
Identities = 463/470 (98%), Gaps = 1/470 (0%)
Strand = Plus / Minus
Query: 6 ggaattctcctgcctctacctcctgttttgtagtaggattcctggaattacaggtatatg 65
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ggaattctcctgcctctacttcctgttttgtagtaggattcctggaattacaggtatatg 451
Query: 66 ttgtgtacctgattttatcgtgggttgtgggggatggcagctgaaaacctcaagcttttg 125
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ttgtgtacctgattttat-gtgggttgtgggggatggcagctgaaaacctcaagcttttg 392
Query: 126 cagggcttcccacactaagtagcattctcagcttagaatgtttgaagggtccgcagaact 185
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 391 cagggcttcccacactaagtagcattctcagcttagaatgtttgaagggtccacagaact 332
Query: 186 tcacatttgagatttatcctgttagatatagatgcttgaatagaatgtctttggttgtag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tcacatttgagatttatcctgttagatatagatgcttgaatagaatgtctttggttgtag 272
Query: 246 gttcaaatctggaggttacaggtgttgggtaacactttatttattcaatgactgctagaa 305
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 271 gttcaaatctggaggttacaggtgttgggtaacactttatttatacaatgaccgctagaa 212
Query: 306 atgatttatgtggcaggctctgtctcagacattggggatatattggtaaagaaaacagaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atgatttatgtggcaggctctgtctcagacattggggatatattggtaaagaaaacagaa 152
Query: 366 aaatgctttgttacatagattttaatatctgaatcaaaagaaacaggtaataaaaaatgt 425
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 151 aaatgctttgttatatagattttaatatctgaatcaaaagaaacaggtaataaaaattgt 92
Query: 426 gacaggtggtgtcagaaggtgataaggaaaaagcactactggagagtggg 475
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gacaggtggtgtcagaaggtgataaggaaaaagcactactggagagtggg 42
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 874
Length adjustment: 10
Effective length of query: 465
Effective length of database: 864
Effective search space: 401760
Effective search space used: 401760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_c07.g1 MSMg01no180_c07.g1 CHROMAT_FILE:
MSMg01no180_c07.g1 PHD_FILE: MSMg01no180_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:19 2005
(294 letters)
>mm_chr2_143135174_143135867
Length = 694
Score = 501 bits (259), Expect = e-146
Identities = 284/295 (96%), Gaps = 6/295 (2%)
Strand = Plus / Plus
Query: 1 atcacaggaaatgaagcaaaatatagttacaaatttgctactctgggttgacacggattc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 201 atcacaggaaatgaagcaaaatatagttacaaatttgctactctggggtgagatggattc 260
Query: 61 tggacatcaaaaggagagctcaggagactccagcaggcttcagctagaaggacagaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggacatcaaaaggagagctcaggagactccagcaggcttcagctagaaggacagaagac 320
Query: 121 aatcaggtgaccctgcagtggagggaatcacattcatgggggtagggagaaacaaagaca 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 aatcaggtgaccctgcagtggagggaatcacattcatgggggtagagagaaacaaagaca 380
Query: 181 gacagacagaaagagacagacagagagacagacagagacaaacagacagaca----caca 236
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 gacagacagaaagagacagacagagagacagacagagacaaacagacagacagacacaca 440
Query: 237 gagagacagagaaagagactgagacagaaaaagagagagagagacagagacaggc 291
||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 gagagacagaggaagagactgagacagaaa--gagagagagagacagagacaggc 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
