Query= MSMg01no180_d15.b1 MSMg01no180_d15.b1 CHROMAT_FILE:
MSMg01no180_d15.b1 PHD_FILE: MSMg01no180_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:25 2005
(354 letters)
>mm_chr2_143990158_143990911
Length = 754
Score = 654 bits (338), Expect = 0.0
Identities = 350/354 (98%)
Strand = Plus / Plus
Query: 1 gttaggggaggagacctggagagggaagaataccaaattccaagagtttaaatgcaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttaggggaggagacctggagagggaagaataccaaattccaagagtttaaatgcaagga 260
Query: 61 acgaaggaattagcactgacagatttagcaaataaaaatgcccagtgcctggttcgattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgaaggaattagcactgacagatttagcaaataaaaatgcccagtgcctggttcgattt 320
Query: 121 gtattttaaatgacgaataatttttattgtctgccatgcattatttcagacactctttca 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtattttaaacgacgaataatttttattgtctgccatgcattatttcagacactctttca 380
Query: 181 tcaaatatttcatacaataaatttatgataaagcgtaatttattgcccatcttaaagtca 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 tcaaatatttcatacaataaatttatgataaaacgtaatttattgcccatcttaaagtca 440
Query: 241 attttaattgggcacccttaatcgtacgttaaaaattatcagctagtttaaacacctttt 300
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatttaattgggcacccttaattgtacgttaaaaattatcagctagtttaaacacctttt 500
Query: 301 agactggtcagctttgcttccctggggatcttgctggtcgtttatacagatgtc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agactggtcagctttgcttccctggggatcttgctggtcgtttatacagatgtc 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_d15.g1 MSMg01no180_d15.g1 CHROMAT_FILE:
MSMg01no180_d15.g1 PHD_FILE: MSMg01no180_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:25 2005
(326 letters)
>mm_chr2_144148461_144149186
Length = 726
Score = 592 bits (306), Expect = e-173
Identities = 321/326 (98%), Gaps = 2/326 (0%)
Strand = Plus / Minus
Query: 1 aaaacaaacaaacaaaaaacaaaaaaaacccaaaaaacaaaaaaaagtaggtttcttctc 60
|||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||
Sbjct: 570 aaaacaaacaaacaaaaaac-aaaaaaaccaaaaaaac-aaaaaaagtaggtttcttctc 513
Query: 61 tttaattctgtaattttctcccaagaggcaaataccattattcatagtttatgggtgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tttaattctgtaattttctcccaagaggcaaataccattattcatagtttatgggtgatg 453
Query: 121 aaattaagtcttagggaagttaaattagttgcttacattcttagattatgggaaatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaattaagtcttagggaagttaaattagttgcttacattcttagattatgggaaatgaag 393
Query: 181 cccttgttgaatttaggaagctggaaaacgtggctctgcgcctagtttctcacactacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cccttgttgaatttaggaagctggaaaacgtggctctgcgcctagtttctcacactacca 333
Query: 241 aggagactgtgtggtaccggttagtgcgtttacacatggagaaattgtaatctgggattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aggagactgtgtggtaccggttagtgcgtttacacatggagaaattgtaatctgggattt 273
Query: 301 gtgtgtttgttgggtttttttgtttg 326
| | ||||||||||||||||||||||
Sbjct: 272 gggcgtttgttgggtttttttgtttg 247
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
