Query= MSMg01no182_p06.b1 MSMg01no182_p06.b1 CHROMAT_FILE:
MSMg01no182_p06.b1 PHD_FILE: MSMg01no182_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:50 2005
(403 letters)
>mm_chr2_92143041_92143843
Length = 803
Score = 690 bits (357), Expect = 0.0
Identities = 393/405 (97%), Gaps = 4/405 (0%)
Strand = Plus / Minus
Query: 1 acctctacagtacacagcaaggaatacagagttgtttagaaagtgtgttctctaatctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 acctctacagtacacagcaaggaatacagagttgtttagaaagtgtgttctctaatctat 544
Query: 61 agtgatgagagcaactgaatcatactcttcctcacacccacagagactcacaggtctctc 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 543 agtgatgagagcaactgaatcatactcttcctcacacccacagagattcacaggtctctc 484
Query: 121 actaacatggggtaatagtcctaatacttcctgagttactgctgaaaatgactactgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 483 actaacatggggtaatagtcctaatacttcctgagttactgctgaaaatgactactggct 424
Query: 181 atcagctgagatgtaggg-ctacagatgttatttgaggctttataatgtccttttcaaaa 239
|||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 423 atcagctgagatgt-gggactacagatgctatttgaggctttataatgtccttttcaaaa 365
Query: 240 acagaagagattggaattgaccccaagcttcccatgctccaccatgcgaatgacaactca 299
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 364 acagaagagattggaattgaccccaagcttcccatgctccaccatgagaatgacaactca 305
Query: 300 aattcacccttgtgagcatttctcttggagtacacacttag-ccccgacctctccatcgc 358
|||||| |||||||||||||||||||||||||||||||||| || | | ||||||||||
Sbjct: 304 aattcatccttgtgagcatttctcttggagtacacacttagtcctc-agttctccatcgc 246
Query: 359 tgacttcacattacagatttgtgctgcttcctatcatccaaacta 403
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgacttcacattacagatttgtgctgcttcctatcatccaaacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_p06.g1 MSMg01no182_p06.g1 CHROMAT_FILE:
MSMg01no182_p06.g1 PHD_FILE: MSMg01no182_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:50 2005
(310 letters)
>mm_chr2_91991783_91992492
Length = 710
Score = 584 bits (302), Expect = e-171
Identities = 305/306 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaatccttagcatcccggtggaaagagaagaagagcagtgaataggccacccaa 64
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaatccttagcatccgggtggaaagagaagaagagcagtgaataggccacccaa 264
Query: 65 taaaatgttggccaggctcttacaaagttctagcctgtgtcccttcctagtcacagactg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaaatgttggccaggctcttacaaagttctagcctgtgtcccttcctagtcacagactg 324
Query: 125 ctacagttcatttgtccacaacttgtttacgcgtacctcgtgtaggccagagccttggcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctacagttcatttgtccacaacttgtttacgcgtacctcgtgtaggccagagccttggcc 384
Query: 185 aggtattcctcaaatcacaccagatcctttgaatgaggtcaccttctactagagtgtcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggtattcctcaaatcacaccagatcctttgaatgaggtcaccttctactagagtgtcta 444
Query: 245 gtttgcttttctaagactgataaccaactttcagaagaaagtcttcatttggctcacagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtttgcttttctaagactgataaccaactttcagaagaaagtcttcatttggctcacagg 504
Query: 305 gtacag 310
||||||
Sbjct: 505 gtacag 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
