Query= MSMg01no183_b01.b1 MSMg01no183_b01.b1 CHROMAT_FILE:
MSMg01no183_b01.b1 PHD_FILE: MSMg01no183_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:59 2005
(675 letters)
>mm_chr2_15701439_15702513
Length = 1075
Score = 1234 bits (638), Expect = 0.0
Identities = 662/672 (98%), Gaps = 5/672 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctatacctgcttagagctcttctcagctcttcttggctgaggctcggtatccc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctatacctgcttagagctcttctcagctcttcttggctgaggctcggtatccc 263
Query: 64 tatcctcccagctcctccaagaagcatttagttccctcagtcttgtgttccaggtttctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatcctcccagctcctccaagaagcatttagttccctcagtcttgtgttccaggtttctt 323
Query: 124 cacagtcaggaggggaatattccaagccaattagcacttgtgcagcaactagcactttgt 183
||||||||||||||||||||||||||||||||||||||||||||| || | ||||||
Sbjct: 324 cacagtcaggaggggaatattccaagccaattagcacttgtgcag----tatc-ctttgt 378
Query: 184 tctaggaacctggtaatgtggggcctgattctgtcccaggcctccctcgacatcagatat 243
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctaggaacctggtaatgtagggcctgattctgtcccaggcctccctcgacatcagatat 438
Query: 244 tgaggccacagctgcataattctttgtacatcagtcacgtagggcaatgccccaagatcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgaggccacagctgcataattctttgtacatcagtcacgtagggcaatgccccaagatcc 498
Query: 304 tggtattctgtctgtactccctccacccccaacacagttacctggcaataaccaggtagt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tggtattctgtctgtactccctccacccccaacacagttacctggcaataaccaggtagt 558
Query: 364 ctcctccccatggtttcctggtaacagctaggtaagcctggcccaatataaaaagggctg 423
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctcctccccatgatttcctggtaacagctaggtaagcctggcccaatataaaaagggctg 618
Query: 424 tttgccctgtcctcactctcttacttctgcttcctgcttgcttttctcttgacctcttgc 483
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 619 tttgccctgtcctcactctcttactcctgcttcctgcttgcttttctcttgacctcttgc 678
Query: 484 tcaccctctctccacattcccttcctccctctcttcatgtagccatggccagcttctact 543
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 679 tcaccctctctccacattcccttcctccctctcttcatgtagccatggccaacttctact 738
Query: 544 tctcagatctctccctctctctgcctttctacaataaaggccttaaaaccatgaactgcc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tctcagatctctccctctctctgcctttctacaataaaggccttaaaaccatgaactgcc 798
Query: 604 tcttctcatcaggatctgccatgctggtgcagtggagcaggtcttcttctaaagagctgc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tcttctcatcaggatctgccatgctggtgcagtggagcaggtcttcttctaaagagctgc 858
Query: 664 atgtctaatctc 675
||||||||||||
Sbjct: 859 atgtctaatctc 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_b01.g1 MSMg01no183_b01.g1 CHROMAT_FILE:
MSMg01no183_b01.g1 PHD_FILE: MSMg01no183_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:59 2005
(647 letters)
>mm_chr2_15794854_15795900
Length = 1047
Score = 551 bits (285), Expect = e-161
Identities = 309/323 (95%), Gaps = 10/323 (3%)
Strand = Plus / Minus
Query: 1 tctctggaagctttcatccctggatgctactcaagcccactgcagccacttctttctcag 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 323 tctctggaagctttcatccctggacgctactcaagcccactgcagccacttctttctcag 264
Query: 61 aggcccagcccactgcagtgtcctgcctcaccacaccaattctggaacagcagtgactga 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 263 aggcccagcccactgcagtgtcctgcctcaccacaccaactctggaacagcagtgactga 204
Query: 121 gaccctattacgaatagagcctcaaagaacatggatgcacaattccttgggggaaatata 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gactctattacgaatagagcctcaaagaacatggatgcacaattccttgggggaaatata 144
Query: 181 tatata----------taagagtgataaagctggattttgaggtagatcaattgtcacca 230
|||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 143 tatatatatatatgtctaagagtgataaagctggattttgaggtagatcaattctcacca 84
Query: 231 tcgaataagtatctccttccccatcatccttgccagaaagagttgccatttgttttattg 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 tcgaataagtatctccttccccatcatccttgccagaaagagttgccatttgttttattg 24
Query: 291 atcttccattctcacgagagtaa 313
|||||||||||||||||||||||
Sbjct: 23 atcttccattctcacgagagtaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
