Query= MSMg01no184_k13.b1 MSMg01no184_k13.b1 CHROMAT_FILE:
MSMg01no184_k13.b1 PHD_FILE: MSMg01no184_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:07 2005
(420 letters)
>mm_chr2_109214215_109215034
Length = 820
Score = 714 bits (369), Expect = 0.0
Identities = 396/405 (97%), Gaps = 1/405 (0%)
Strand = Plus / Plus
Query: 16 gaattc-tcatgatgaggagacgtggcagcgagcatcagggatgatagcaggagcagaga 74
|||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 215 gaattcatcatgatgaggagatgtggcagcaagcatcagggatgatagcaggagcagaga 274
Query: 75 gaagatgaaagatggtctttttgatataaacagaaagtagaaagaacaactggattgaaa 134
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 275 gaagatgaaagatggtctttttgatataaacagaaagtagaaagaacaactagattgaaa 334
Query: 135 tgttgctctaaactctcagaatctgcccacagggacatacttcctccaacaagtttctgt 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgttgctctaaactctcagaatctgcccacagggacatacttcctccaacaagtttctgt 394
Query: 195 gtcctcaaggttccataacctcacaaacagcaccacaaactacagagcaagcgtttacat 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtcctcaaggttccataacctcacaaacagcaccacaaactacagagcaagcgtttacat 454
Query: 255 tcatgagtttagagttcaaaattgtccctattgtcagacttgattgctatccttccattg 314
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tcatgagtttagagttcataattgtccctattgtcagacttgattgctatccttccattg 514
Query: 315 tgtgaaaacacagggagtcatgttttccccagctgtaagacagagatatctacaaggttc 374
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 515 tgtgaaaacatggggagtcatgttttccccagctgtaagacagagatatctacaagggtc 574
Query: 375 tctttccctggaatgggcttcaatcttttggcctttggaatatgg 419
|||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 575 tctttccctggaatgggctttaatcttttggcctttggaatatgg 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_k13.g1 MSMg01no184_k13.g1 CHROMAT_FILE:
MSMg01no184_k13.g1 PHD_FILE: MSMg01no184_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:07 2005
(281 letters)
>mm_chr2_109252837_109253517
Length = 681
Score = 509 bits (263), Expect = e-148
Identities = 275/279 (98%)
Strand = Plus / Minus
Query: 1 tagtgtctctttgatggatgaaaataaggatgaagacatagtggaatggatacagaaata 60
||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 326 tagtgtctctttgatggatgaaaataaggatgaagacatggtagaatggatgcagaaata 267
Query: 61 acaactactgagagccttcaatgccaggcaccacactcgtgaacattctgttatctatgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gcaactactgagagccttcaatgccaggcaccacactcgtgaacattctgttatctatgg 207
Query: 121 gcagattcctcacttacacaatgagaaaatgtggttcaggacaattaataacttgtctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gcagattcctcacttacacaatgagaaaatgtggttcaggacaattaataacttgtctaa 147
Query: 181 gatcacagagctagaaaatagcagaaacaggtctccccaccattgtcttccaaattaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gatcacagagctagaaaatagcagaaacaggtctccccaccattgtcttccaaattaact 87
Query: 241 acattctgagctacagaatgggctacagaatgatctttc 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 86 acattctgagctacagaatgggctacagaatgatctttc 48
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
