Query= MSMg01no184_p04.b1 MSMg01no184_p04.b1 CHROMAT_FILE:
MSMg01no184_p04.b1 PHD_FILE: MSMg01no184_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:32 2005
(611 letters)
>mm_chr2_50606192_50607202
Length = 1011
Score = 1160 bits (600), Expect = 0.0
Identities = 606/608 (99%)
Strand = Plus / Minus
Query: 4 ggaattcttaatctattgtatctgccatttgagatattaaagaacaaaagataaatccgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ggaattcttaatctattgtatctgccatttgagatattaaagaacaaaagataaatccgt 752
Query: 64 tagcggtaatgaagtcattactgatgtttttattattaccagtgttatcatcatcattat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tagcggtaatgaagtcattactgatgtttttattattaccagtgttatcatcatcattat 692
Query: 124 atgaaatgctgcatattctttctgcattaaccagaaatatccatctgactttcacatgtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 atgaaatgctgcatattctttctgcattaaccagaaatatccatctgactttcacatgtt 632
Query: 184 tgatacaaacattctaacattttatcaaactcatttgggaattttagctgcatgaaagat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tgatacaaacattctaacattttatcaaactcatttgggaattttagctgcatgaaagat 572
Query: 244 aacgtttcttaattcctgtccttgccatgctaaccatgttttagcatgtctgatccttta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aacgtttcttaattcctgtccttgccatgctaaccatgttttagcatgtctgatccttta 512
Query: 304 gaatgaagcatatatttcatacctttccaaacaaacacttagcatccaggcaatgagaaa 363
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 511 gaatgaagcagatatttcatacatttccaaacaaacacttagcatccaggcaatgagaaa 452
Query: 364 gtatgtaaacaatgagacaccgcctagggcattttctacacagctgaagctggcctcctc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gtatgtaaacaatgagacaccgcctagggcattttctacacagctgaagctggcctcctc 392
Query: 424 cagcattattgtggccactgtgggtttgttaatccagtcagtgattatttcaacaggagg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cagcattattgtggccactgtgggtttgttaatccagtcagtgattatttcaacaggagg 332
Query: 484 ctgagcaggaggctgatccctctttcctcccgactctcagctgcggagagcaactgtgct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ctgagcaggaggctgatccctctttcctcccgactctcagctgcggagagcaactgtgct 272
Query: 544 gttcagatttccatcatggtaacaaaagcctaagataagtcagcttatgagaatgaaacg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gttcagatttccatcatggtaacaaaagcctaagataagtcagcttatgagaatgaaacg 212
Query: 604 tttctttg 611
||||||||
Sbjct: 211 tttctttg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_p04.g1 MSMg01no184_p04.g1 CHROMAT_FILE:
MSMg01no184_p04.g1 PHD_FILE: MSMg01no184_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:32 2005
(243 letters)
>mm_chr2_50427977_50428618
Length = 642
Score = 437 bits (226), Expect = e-127
Identities = 235/238 (98%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 2 ttagtcaactggggccatgttcaagccaagtgttgaggggcagattaacatcaaatgttg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttagtcaactggggccatgttcaagccaagtgttgaggggcagattaacatcaaatgttg 261
Query: 62 ggctggtaggtcaaaactcagttggtaacatgctttcctagcccacttttataataggaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggctggtaggtcaaaactcagttggtaacatgctttcctagcccacttttataataggaa 321
Query: 122 agcattttcccagtattcaaggcggcatgacccagctctttgcttcagttggttgagtcc 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agcattttcccagtattcaaggcggcatgacccagctctttgcttcagttggttgagtc- 380
Query: 182 agataaggcttctacatcataagatggtttcttatgtttttatgtaggatctcttttg 239
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 agataaggcttctacattataagacggtttcttatgtttttatgtaggatctcttttg 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 642
Length adjustment: 9
Effective length of query: 234
Effective length of database: 633
Effective search space: 148122
Effective search space used: 148122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
