Query= MSMg01no185_n19.b1 MSMg01no185_n19.b1 CHROMAT_FILE:
MSMg01no185_n19.b1 PHD_FILE: MSMg01no185_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:41 2005
(320 letters)
>mm_chr2_29642860_29643580
Length = 721
Score = 543 bits (281), Expect = e-159
Identities = 308/319 (96%), Gaps = 5/319 (1%)
Strand = Plus / Minus
Query: 5 gaattctcggcaacttaccaagtttgagggcagcctgggatatatgagaaacaaacaaac 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaattctcggcaacttagcaagtttgagggcagcctgggatatatgagaaacaaacaaac 511
Query: 65 aaaaaactcttgacca---aattcaaaaataacataaccgagaattcggttgctcgatat 121
||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aaaaaactcctga--aaagaattcaaaaataacataaccgagaattcggttgctcgatat 453
Query: 122 ccggccctattttcttctccatctcttatttccccccccgagggcaataagaaaagaacc 181
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 452 ccggccctattttcttctccatctcttatttcccccccggagggcaataagaaaagaacc 393
Query: 182 tcttcctgccaaggaaacaaggcggctacctacagtagggaccacatttgggaaaggacc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tcttcctgccaaggaaacaaggcggctacctacagtagggaccacatttgggaaaggacc 333
Query: 242 acgcagcacttccgcccgcatccccgcttctggatgatgtcgtaccgctgagttccagcc 301
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 332 acgcagcacttccgcccgcatccccgcttctggatgatgttgaaccgctgagttccagcc 273
Query: 302 atgggttcttctggtctag 320
|||||||||||||| ||||
Sbjct: 272 atgggttcttctggcctag 254
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_n19.g1 MSMg01no185_n19.g1 CHROMAT_FILE:
MSMg01no185_n19.g1 PHD_FILE: MSMg01no185_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:41 2005
(291 letters)
>mm_chr2_29502781_29503471
Length = 691
Score = 561 bits (290), Expect = e-164
Identities = 290/290 (100%)
Strand = Plus / Plus
Query: 1 tcattgcgggtcaaatacagagagtgtgccttttactttagatgaaataatcttacatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattgcgggtcaaatacagagagtgtgccttttactttagatgaaataatcttacatta 260
Query: 61 tttgttatcctgcacatctcctggtgctggtgggaaccccggaccatcacccttgatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgttatcctgcacatctcctggtgctggtgggaaccccggaccatcacccttgatact 320
Query: 121 acattattaaggaaaacagtgggaaccatggtaaaatacagaaaaaacactactgagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acattattaaggaaaacagtgggaaccatggtaaaatacagaaaaaacactactgagttc 380
Query: 181 ctacaggacctaaaaccttataagaggacagaagccttagttgctgctgttgttttccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctacaggacctaaaaccttataagaggacagaagccttagttgctgctgttgttttccag 440
Query: 241 agccttgcacatgcacacacccacggttttccataggcacaagcatgtgt 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agccttgcacatgcacacacccacggttttccataggcacaagcatgtgt 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
