Query= MSMg01no185_o21.b1 MSMg01no185_o21.b1 CHROMAT_FILE:
MSMg01no185_o21.b1 PHD_FILE: MSMg01no185_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:45 2005
(234 letters)
>mm_chr2_178755008_178755642
Length = 635
Score = 416 bits (215), Expect = e-121
Identities = 227/233 (97%), Gaps = 5/233 (2%)
Strand = Plus / Minus
Query: 1 gagccctgttgtgctgacatcaccagtgaggaggtacgaacgctagtggagctcgtaagg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gagccctgttgtgctgatatcaccagtgaggaggtacgaacgctagtggagctcgtaagg 372
Query: 61 gccctgaagataaagctgaacattgtaagactgacactggggacacactactcccagtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gccctgaagataaagctgaacattgtaagactgacactggggacacactactcccagtgc 312
Query: 121 tgggcccaggaggctctgctagaggagcagaaggatagacagctgtggctgacaagaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgggcccaggaggctctgctagaggagcagaaggatagacagctgtggctgacaagaaga 252
Query: 181 aaggcctcatgggatcgaggac---tgaactggatacaaaagatgtggctatc 230
|||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 251 aaggcctcatgggatcga--actcatgaactggatacaaaagatgtggctatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 635
Length adjustment: 9
Effective length of query: 225
Effective length of database: 626
Effective search space: 140850
Effective search space used: 140850
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no185_o21.g1 MSMg01no185_o21.g1 CHROMAT_FILE:
MSMg01no185_o21.g1 PHD_FILE: MSMg01no185_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:46 2005
(277 letters)
>mm_chr2_178589367_178590043
Length = 677
Score = 497 bits (257), Expect = e-145
Identities = 272/277 (98%)
Strand = Plus / Plus
Query: 1 caaaatttcttgccatgcaagcctgacttcctgaggtcaatcccagggacccagttaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaatttcttgccatgcaagcctgacttcctgaggtcaatcccagggacccagttaaaa 260
Query: 61 gccagatgtggatgtggtggtgcacatctggaatctgtcactgcagtaacgaggtagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccagatgtggatgtggtggtgcacatctggaatctgtcactgcagtaacgaggtagaaa 320
Query: 121 gcagaggtgggggaatggccaggagctcctggagcagctgccaagagcgggactggaaga 180
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 gcagaggtgggggaatagccaggagctcctggagcagctgccaagagcaggactggaaga 380
Query: 181 tcccgtcctaacaaggtcaaaggcaaaagctgattcttgaaatttactgtctgacttcca 240
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctgtcctaacacggtcaaaggcaaaagctgattcttgaaatttactgtctgacttcca 440
Query: 241 catccataccatggtatgttatctcccacagcacata 277
||||||||||||||||||||| |||||||||||||||
Sbjct: 441 catccataccatggtatgttacctcccacagcacata 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
