Query= MSMg01no186_g17.b1 MSMg01no186_g17.b1 CHROMAT_FILE:
MSMg01no186_g17.b1 PHD_FILE: MSMg01no186_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:24 2005
(205 letters)
>mm_chr2_31665041_31665645
Length = 605
Score = 354 bits (183), Expect = e-102
Identities = 195/199 (97%)
Strand = Plus / Plus
Query: 5 gaattcaaggtagtctcattactctgtgcccccatacctgtctcattgtctcgaggtccc 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaggtagcctcattactctgtgcccccatacctgtctcattgtctcgaggtccc 264
Query: 65 cccccccacatcccccggtgggaactgttcccttccctcacagaggatgcttgtgtttgc 124
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cccccccacatcccttggtgggaactgttcccttccctcacagaggatgcttgtgtttgc 324
Query: 125 agtgaccatgggtgagctgagccaagctggctcatcctctgaggaagcccctgaagctgg 184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtgaccatgggtgagctgagccgagctggctcatcctctgaggaagcccctgaagctgg 384
Query: 185 aagtggcgggggacggagg 203
|||||||||||||||||||
Sbjct: 385 aagtggcgggggacggagg 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 605
Length adjustment: 8
Effective length of query: 197
Effective length of database: 597
Effective search space: 117609
Effective search space used: 117609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no186_g17.g1 MSMg01no186_g17.g1 CHROMAT_FILE:
MSMg01no186_g17.g1 PHD_FILE: MSMg01no186_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:24 2005
(288 letters)
>mm_chr2_31827281_31827969
Length = 689
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 ttggaaatggtctctgaagaccagtcaggaagctgtaaggaagacaatctgcaaagctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttggaaatggtctctgaagaccagtcaggaagctgtaaggaagacaatctgcaaagctag 430
Query: 61 gcttggtgcttactgaaatctcactgccaacctggaggccctcaggagggtgagtcctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gcttggtgcttactgaaatctcactgccaacctggaggccctcaggagggtgagtcctga 370
Query: 121 cccaaggtgttccgtggagaccacaccttcctcaagtatcaggctgggaaatgctgctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cccaaggtgttccgtggagaccacaccttcctcaagtatcaggctgggaaatgctgctct 310
Query: 181 ctaccctt-cctttgaccaatgcagcctagagcgggtctccagtccacactctctgatag 239
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ctaccctttcctttgaccaatgcagcctagagcgggtctccagtccacactctctgatag 250
Query: 240 cccccaccaaccttcagcaaggcacttaacccctggaggccagcagtga 288
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cccccaccaaccttcagcaaggcacttaacccctggaggccagcagtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
