Query= MSMg01no186_h23.b1 MSMg01no186_h23.b1 CHROMAT_FILE:
MSMg01no186_h23.b1 PHD_FILE: MSMg01no186_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:30 2005
(322 letters)
>mm_chr2_139013801_139014522
Length = 722
Score = 538 bits (278), Expect = e-157
Identities = 298/314 (94%), Gaps = 15/314 (4%)
Strand = Plus / Minus
Query: 5 gaattccccacccctaagccctttaccccataaaaacccctagctttttttttttttttt 64
|||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 578 gaattccccacccctaagccctttaccccataaaaacccctagc---------------t 534
Query: 65 tttttttttttttttggagagacagaaatgttttattagagttacatcgtattgttaaag 124
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 533 tttttttttttttttggagagacagaaatgttttattagagttacatcatattgttaaag 474
Query: 125 cctttaaaatgattactgtaaattttacctttaggcctttgtagaaagaaaagaaaatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cctttaaaatgattactgtaaattttacctttaggcctttgtagaaagaaaagaaaatga 414
Query: 185 aggaactttccaactttaaagatatgtgacaacacccaaagaggtaaaatgctctaaaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aggaactttccaactttaaagatatgtgacaacacccaaagaggtaaaatgctctaaaaa 354
Query: 245 tgttctcccagctttaggaaggaaggcgatgagctgtaatctgaatatgcaaatggcatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tgttctcccagctttaggaaggaaggcgatgagctgtaatctgaatatgcaaatggcatt 294
Query: 305 gctaaatatgatga 318
||||||||||||||
Sbjct: 293 gctaaatatgatga 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_h23.g1 MSMg01no186_h23.g1 CHROMAT_FILE:
MSMg01no186_h23.g1 PHD_FILE: MSMg01no186_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:30 2005
(292 letters)
>mm_chr2_138918397_138919088
Length = 692
Score = 565 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Plus
Query: 1 cagtcaagtctccccagaataccttagtcactatgaaagaaaatgtcagtgtccatcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtcaagtctccccagaataccttagtcactatgaaagaaaatgtcagtgtccatcata 260
Query: 61 ggggagcagtagagaaacctggctgaatttccatgttcctaccatgccttccccatacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggagcagtagagaaacctggctgaatttccatgttcctaccatgccttccccatacaa 320
Query: 121 tgatgaagaggaaaatagcagatgatccagtgcaaattaatataaagaatacaattagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatgaagaggaaaatagcagatgatccagtgcaaattaatataaagaatacaattagga 380
Query: 181 accaaaaatgggatatttaaaaagagtaatgttccacaaagttgactgaagataaagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accaaaaatgggatatttaaaaagagtaatgttccacaaagttgactgaagataaagaag 440
Query: 241 gatgccatgggaatagaggatgttgggattctgcagggtacataactctgca 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgccatgggaatagaggatgttgggattctgcagggtacataactctgca 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
