Query= MSMg01no186_j04.b1 MSMg01no186_j04.b1 CHROMAT_FILE:
MSMg01no186_j04.b1 PHD_FILE: MSMg01no186_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:36 2005
(247 letters)
>mm_chr2_178981219_178981865
Length = 647
Score = 447 bits (231), Expect = e-130
Identities = 243/247 (98%), Gaps = 2/247 (0%)
Strand = Plus / Plus
Query: 1 tgatgaatgtagttttaaaattcacatctcaagcctatggctgtttacac-ggagagatg 59
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||
Sbjct: 201 tgatgaatgtagttttaaaattcacatctcaagcctatggctgtttac-caggagaggtg 259
Query: 60 aatactcccaagggtcccagtgttttgtttcagatcctgtggcctcttacagtgagctca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatactcccaagggtcccagtgttttgtttcagatcctgtggcctcttacagtgagctca 319
Query: 120 gattgccacaaagaaaccctacaacctggccctccagtcaagcaggcagaggacacgtgt 179
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 320 gattgccacaaagaaaccctacaacctggccctctagtcaagcaggcagaggacacgtgt 379
Query: 180 ctcaatgggaaggctgccgatgaacgtgcaaagccaaagccacagcacagactccacaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctcaatgggaaggctgccgatgaacgtgcaaagccaaagccacagcacagactccacaaa 439
Query: 240 tgcaaaa 246
|||||||
Sbjct: 440 tgcaaaa 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no186_j04.g1 MSMg01no186_j04.g1 CHROMAT_FILE:
MSMg01no186_j04.g1 PHD_FILE: MSMg01no186_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:36 2005
(214 letters)
>mm_chr2_179146715_179147328
Length = 614
Score = 393 bits (203), Expect = e-114
Identities = 209/211 (99%)
Strand = Plus / Minus
Query: 1 tccatgaaggacagcacccatggctgctgggaacccagcacagtggcagggacaggcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tccatgaaggacagcacccatggctgctgggaacccagcacagtggcagggacaggcaag 352
Query: 61 agcttaccacctctcagcaatggcaaaccaagccacacttccatcccgaaacaggagccc 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 agcttaccacttctcagcaatggcaaaccaagccacacttccatcccgaaacaggagccc 292
Query: 121 aaatattggctacctccacatgaggtgaggtgctgagtctcccctcagggcactgcacag 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 291 aaatattggctacctccacatgaggtgaggtgctgagtcttccctcagggcactgcacag 232
Query: 181 ttcacagtgcacagtggtgggggtaggggtg 211
|||||||||||||||||||||||||||||||
Sbjct: 231 ttcacagtgcacagtggtgggggtaggggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
