TTCTCTTTTTTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCGCGGAATTCTTTTGAGATTGTGTTACCTCACTCAGGATGAT
GCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATTAATTATTTCTTTT
TAATAGCTCCATTGTGTAAATGTATCACATTTTCTGTATCCATTCCTATG
TTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCT
GCTATGAACATAGTGGAGCAGGTGTCCTTCTTACCGGCTGGAACATCTTC
TGAATATATGCCCAGGAGGGGTATTGCGGGATCCTCTGGTAGTACTATGT
CCAATTTCCTGAGGAACAGCCATATTTTTTTCCCCACCGCCCCATAAGCT
TGCAATCCTACCAACAATGGAGGAGATTCCTCTATCTCTACATCCTTGCC
AGAATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTG
AGGTGGAATCTCAGGGTTGTTTTGGTTTGCATTTCCCTGATGATTAAGGA
TGCTGAACATTTTTTCAGGTGCTTCACAGCCATTCAATATTCCTCAGGTG
AGAATTCTTTTCTTACCCCTGAGCCCCACTTTTCTAACCTATTTCTTTAT
CAGGTATTTTCCTCGCTCACCTTTCTCACGCTATCCCATATGGCCCCCAT
ATCCACCCCTCACTCCCTTACTCACCCACTCCCCTTTT

TGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCCTTGGTCTGAAACATATTTCTCCA
GATAATAACTTTATACCAATCTTTGTTGTTTCTTCCTCATCTAAAGATAT
ATTGTTATATTTATATCCAAATACATAATATCAAGACATTTCTGTTATTT
TTTCTCCAGAGATATAATGAAATGATAAAATACTCAGAGTCATCCAAATT
CATGCCTAGAATGAGGCATCTCATCATGGAACCAACGATATAATTACAAG
TTATAAGTTATAATTGGGCAGCTAATTGTCAAAATTTGATTCTGCTGGCA
GTTATAAAATTCTTGACCTTAAACAATTTCTTTAATTTGGGGAAGCCTTA
ATTTTCAACATTTTAAAATGAAATGCTTGGAGTAAGTAATTGATAAAACG
TCTTTAAGAATTATTTTAACTTACTAATGCAAAAGGTTCACAAAAGGGGA
AACAGTAGAGTTTTATTTACTCTGCTTGTTGCCTTCCAACAAGCCAAGAG
GTATAGAATTACTTCCATTTATTTGTTTTTTTTCCATTTAAATGTTTTAT
TAGTTCTTTGAAATTTTGATGCATTATGTTTTTCGTAATATCCATCTCAC
ATCTCCTTCAAGATCCTTCCCTAATTCTATAGCCTCCAATTTCAGTCAAT
GTTCTGTTGCCATGATGATA

Query= MSMg01no188_p07.g1 MSMg01no188_p07.g1 CHROMAT_FILE:
MSMg01no188_p07.g1 PHD_FILE: MSMg01no188_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:47 2005
         (549 letters)



>mm_chr2_97128926_97129876
          Length = 951

 Score = 1023 bits (529), Expect = 0.0
 Identities = 545/551 (98%), Gaps = 2/551 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccttggtctgaaacatatttctccagataataactttataccaatctttgttgtttctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccttggtctgaaacatatttctccagataataactttataccaatctttgttgtttctt 260

                                                                       
Query: 61  cctcatctaaagatatattgttatatttatatccaaatacataatatcaagacatttctg 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 cctcatctaaagatatattgttatatttatattcaaatacataatatcaagacatttctg 320

                                                                       
Query: 121 ttattttttctccagagatataatgaaatgataaaatactcagagtcatccaaattcatg 180
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttattttttcttcagagatataatgaaatgataaaatactcagagtcatccaaattcatg 380

                                                                       
Query: 181 cctagaatgaggcatctcatcatggaaccaacgatataattacaagttataagttataat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctagaatgaggcatctcatcatggaaccaacgatataattacaagttataagttataat 440

                                                                       
Query: 241 tgggcagctaattgtcaaaatttgattctgctggcagttataaaattcttgaccttaaac 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 tgggcagctaattgtcaaaatttgattctgctggcagttataaaattcttgaccttgaac 500

                                                                       
Query: 301 aatttctttaatttggggaagccttaattttcaacattttaaaatgaaatgcttggagta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatttctttaatttggggaagccttaattttcaacattttaaaatgaaatgcttggagta 560

                                                                       
Query: 361 agtaattgataaaacgtctttaagaattattttaacttactaatgcaaaaggttcacaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 agtaattgataaaacgtctttaagaattattttaacttactaatgcaaaaggtccacaaa 620

                                                                       
Query: 421 aggggaaacagtagagttttatttactctgcttgttgccttccaacaagccaagaggtat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggggaaacagtagagttttatttactctgcttgttgccttccaacaagccaagaggtat 680

                                                                       
Query: 481 agaattacttccatttatttgtttttttt--ccatttaaatgttttattagttctttgaa 538
           |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 681 agaattacttccatttatttgtttttttttcccatttaaatgttttattagttctttgaa 740

                      
Query: 539 attttgatgca 549
           |||||||||||
Sbjct: 741 attttgatgca 751


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 951
Length adjustment: 10
Effective length of query: 539
Effective length of database: 941
Effective search space:   507199
Effective search space used:   507199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)