Query= MSMg01no191_c09.b1 MSMg01no191_c09.b1 CHROMAT_FILE:
MSMg01no191_c09.b1 PHD_FILE: MSMg01no191_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:39 2005
(320 letters)
>mm_chr2_179655440_179656155
Length = 716
Score = 569 bits (294), Expect = e-166
Identities = 309/316 (97%), Gaps = 4/316 (1%)
Strand = Plus / Plus
Query: 5 gaattccaccccatgcttttccgagtctggctgaaccccagcagagctgatcatgtgagc 64
||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 205 gaattccaccccatgcttttccgagtcgggctgaaccccagca----tgatcatgtgagc 260
Query: 65 atgtattttagctctttatacgcataaaaaggtgacttgaaaatcaagtgtccaacgcaa 124
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtgttttagctctttatacgcataaaaaggtgacttgaaaatcaagtgtccaacgcaa 320
Query: 125 gaccacacctctatggaaggccaggagctcccctagctcttaaggaaggcgctttcccac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaccacacctctatggaaggccaggagctcccctagctcttaaggaaggcgctttcccac 380
Query: 185 ccgctccggacctcagcctcctcatgttctgctgtacctctgctcctgatcctggcccag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccgctccggacctcagcctcctcatgttctgctgtacctctgctcctgatcctggcccag 440
Query: 245 tgcagtccactttcctctttttcctgggcccgatcgctgccagtgcagtgaggttggcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcagtccactttcctctttttcctgggcccgatcgctgccagtgcagtgaggttggcat 500
Query: 305 ctcgttgtcgcatctg 320
||||||||||||||||
Sbjct: 501 ctcgttgtcgcatctg 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 716
Length adjustment: 9
Effective length of query: 311
Effective length of database: 707
Effective search space: 219877
Effective search space used: 219877
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_c09.g1 MSMg01no191_c09.g1 CHROMAT_FILE:
MSMg01no191_c09.g1 PHD_FILE: MSMg01no191_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:39 2005
(282 letters)
>mm_chr2_179765196_179765876
Length = 681
Score = 485 bits (251), Expect = e-142
Identities = 275/283 (97%), Gaps = 3/283 (1%)
Strand = Plus / Minus
Query: 1 aagaaatgctggagaaccaccaccccagcctgggatcttctaggaagtacagtggtccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 481 aagaaatgctggagaaccaccaccccagcctgggatcttctaggaagtacagtggtcaga 422
Query: 61 ctctgaagcgaacttctcgaacagctttatgaaaaccagaatgagaacaaactacaacaa 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctctgaagcgaagttctcgaacagctttatgaaaaccagaatgagaacaaactacaacaa 362
Query: 121 aggttaacaacccagtttcttaaaagagtaagtccctcctaagcaaggatgggctgccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggttaacaacccagtttcttaaaagagtaagtccctcctaagcaaggatgggctgccag 302
Query: 181 gtgcccactgtgggagatggccccccacgcccacaaaacaattct-ctgctgctggagag 239
||||||||||||||||||||||||||| ||||||||| ||| || |||| |||||||||
Sbjct: 301 gtgcccactgtgggagatggccccccatgcccacaaat-aat-cttctgccgctggagag 244
Query: 240 acatgaagtgcctccagtactctctgctacccctgacctgtcc 282
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 acatgaagtgcctccagtactctctgctacccctgacctgtcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 681
Length adjustment: 9
Effective length of query: 273
Effective length of database: 672
Effective search space: 183456
Effective search space used: 183456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
