Query= MSMg01no191_d16.b1 MSMg01no191_d16.b1 CHROMAT_FILE:
MSMg01no191_d16.b1 PHD_FILE: MSMg01no191_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:45 2005
(318 letters)
>mm_chr2_34638211_34638928
Length = 718
Score = 526 bits (272), Expect = e-154
Identities = 299/312 (95%), Gaps = 8/312 (2%)
Strand = Plus / Plus
Query: 5 gaattcaaaaccaatttggtatacaaaaagcaagttccaggacagccaaggtacaaagag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaattcaaaaccaatttggtatacaaaaagcaagttccaggacagccaaggtacaaagag 272
Query: 65 atacactgcctcggaaataaatgaaggaaggaagggagggagggagggaaaaccctgcag 124
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 273 atacactgccttggaaataaatgaaggaagggagggagggagggagggaaaaccctgcag 332
Query: 125 ccaatgaagaaatcccagctagccagcctgcctctgaggacctagtgctttgagagaact 184
||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 333 ccaatgaagaaatcccagctagcgagc-tgcctctgaggacctagtg-------agaact 384
Query: 185 cgaatactctgcataggtgttcttgtgcctccggcctctcatctctcttctctgtagtct 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 cgaatactctgcataggtgttcttgtgcctccggcctctcatccctcttctctgtagtct 444
Query: 245 ggagcaaactaggcttggctcatgtatccatccatccgctcttgagcagataagcactta 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 445 ggagcaaactaggcttggctcatgtatccatccacccgctcttgagcagataagcactta 504
Query: 305 ctcactctctgg 316
||||||||||||
Sbjct: 505 ctcactctctgg 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_d16.g1 MSMg01no191_d16.g1 CHROMAT_FILE:
MSMg01no191_d16.g1 PHD_FILE: MSMg01no191_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:46 2005
(283 letters)
>mm_chr2_34800185_34800867
Length = 683
Score = 534 bits (276), Expect = e-156
Identities = 279/280 (99%)
Strand = Plus / Minus
Query: 1 cggtgccagcaagtttaaaaacagcctcagtgcatagtgagaagcagtgtttcctggggt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 480 cggtgccagcaagtttaaaaacagcctcagtggatagtgagaagcagtgtttcctggggt 421
Query: 61 atattcaagggcttgtgccagggcagagtttgcgtcgtgcttaggtgatccacttctcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atattcaagggcttgtgccagggcagagtttgcgtcgtgcttaggtgatccacttctcag 361
Query: 121 ggaggttaagtggtctgctctgggtaaagacgctcagctctgcggaagtcccaagacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ggaggttaagtggtctgctctgggtaaagacgctcagctctgcggaagtcccaagacttg 301
Query: 181 acagaagccccgcccccagcggaagtaggtttctctgcagagtggagggaggtcccagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 acagaagccccgcccccagcggaagtaggtttctctgcagagtggagggaggtcccagct 241
Query: 241 cgagtttctgagtcagaagccaaggctaggtgcctgtgtc 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cgagtttctgagtcagaagccaaggctaggtgcctgtgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
