Query= MSMg01no192_c01.b1 MSMg01no192_c01.b1 CHROMAT_FILE:
MSMg01no192_c01.b1 PHD_FILE: MSMg01no192_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:06 2005
(424 letters)
>mm_chr2_103976151_103976974
Length = 824
Score = 737 bits (381), Expect = 0.0
Identities = 402/409 (98%)
Strand = Plus / Plus
Query: 16 gaattctcccagagtgatgggaggcatcaccacaagcagaatgtagggccctggagagag 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattctcccagagtgatgggaggcatcaccacaagcagaatgtagggccctggagagag 275
Query: 76 ctgcctcgaatccctctctccccacactgatgagtggtagaaggctttcctttctcagca 135
|||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 276 ctgcatcggatccctctctccccacactgatgagtggtagaaggctttccttcctcagca 335
Query: 136 ccatcacctctccccagcctccttagcttcctctctgcttggctggcttatgggtcacct 195
|| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ccgttacctctccccagggtccttagcttcctctctgcttggctggcttatgggtcacct 395
Query: 196 gggttcttggacaaaagacatatccacagaggataggtcagtagcgctgagtacaggagt 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gggttcttggacaaaagacatatccacagaggataggtcagtagcgctgagtacaggagt 455
Query: 256 ctttgctaggtgacccatgggtgacataccagctctggcaaaataaagagatccacatta 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ctttgctaggtgacccatgggtgacataccagctctggcaaaataaagagatccacatta 515
Query: 316 tcgggaatattcttggaagaactttgtgagttacagtgaccaccatgctcgcaaaatgcc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tcgggaatattcttggaagaactttgtgagttacagtgaccaccatgctcgcaaaatgcc 575
Query: 376 aggctgtaagcttcgcattctgtctccccctccacagtgtcctcttctg 424
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aggctgtaagcttcgcattctgtctccccctccacagtgtcctcttctg 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_c01.g1 MSMg01no192_c01.g1 CHROMAT_FILE:
MSMg01no192_c01.g1 PHD_FILE: MSMg01no192_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:06 2005
(297 letters)
>mm_chr2_104032277_104032974
Length = 698
Score = 516 bits (267), Expect = e-151
Identities = 288/295 (97%), Gaps = 1/295 (0%)
Strand = Plus / Minus
Query: 1 catctgtcaggacatttgctgcatcataacatttgttggatttccttcaggcaacagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 catctgtcaggacatttgctgcatcataacatttgttggatttccttcaggcaacagatg 436
Query: 61 aagaactctgtctaccgaagccggcagtctctgaatagtccgagtccgggataaactgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 435 aagaactctgtctaccgaagccggcagtctctgaatagtccgagtccgggagaaactgag 376
Query: 121 atggaccttctggtcacacgcgagcgaccccgacgtggaatccggaacagcggatatgat 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atggaccttctggtcacgcgcgagcgaccccgacgtggaatccggaacagcggatatgat 316
Query: 181 gtaagtgcgtggtggactggggtggacagaagcttccctgagaca-ttcaagatgcccag 239
||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 315 gtaagtgtgtggtggattggggtggacagaagcttccctgagacatttcaagatgcccag 256
Query: 240 caaggttgtctatgtagtggcggaggggtttggggggtaagtggtagaggggatg 294
|||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 255 caaggttgtctatgtagtggtggagggggttggggggtaagtggtagaggggatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 698
Length adjustment: 9
Effective length of query: 288
Effective length of database: 689
Effective search space: 198432
Effective search space used: 198432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
