Query= MSMg01no193_e13.b1 MSMg01no193_e13.b1 CHROMAT_FILE:
MSMg01no193_e13.b1 PHD_FILE: MSMg01no193_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:37 2005
(447 letters)
>mm_chr2_114198028_114198874
Length = 847
Score = 710 bits (367), Expect = 0.0
Identities = 391/403 (97%), Gaps = 10/403 (2%)
Strand = Plus / Plus
Query: 17 gaattctacatgacccatgttgatttttttccaaaa-ctcttagctttccatttgaaatg 75
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 217 gaattctacatgacccatgttgatttttt-ccaaaaactcttagctttccatttgaaatg 275
Query: 76 taattgattatattaattaatcactaggagatcaacgaccctggaatctggggaatagct 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 taattgattatattaattaatcactaggagatcaacgaccctggaatctggggaatagct 335
Query: 136 ttttgataatatgacagcctctttttttttttattctttctgtcagctttcactttgtac 195
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 336 ttttgataatatgacagcctcttttttttattattctttctgtcagctttcactttgtac 395
Query: 196 ctttaaaattctatctttgcattaattgccatattttggagcagtcttttgcctggaaat 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctttaaaattctatctttgcattaattgccatattttggagcagtcttttgcctggaaat 455
Query: 256 ttaatactgtttttcaaatggaagcctgctttgaattaacatttctttgacaaggcatat 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttaatactgtttttcaaatggaagcctgctttgaattaacatttctttgacaaggcatat 515
Query: 316 caatattgcactttgagattttatttattgtttttctttcctggtttg----tttttcct 371
|||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 516 caatattgcactttgagattttatttattgtttttctttcctggtttggcaat----cct 571
Query: 372 caaagctcaaaaacatagttgtctggttccccccacccccctg 414
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 572 caaagctcaaaaacatagttgtctggttccccccactcccctg 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_e13.g1 MSMg01no193_e13.g1 CHROMAT_FILE:
MSMg01no193_e13.g1 PHD_FILE: MSMg01no193_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:37 2005
(379 letters)
>mm_chr2_114299967_114300745
Length = 779
Score = 714 bits (369), Expect = 0.0
Identities = 375/377 (99%)
Strand = Plus / Minus
Query: 1 tccttagtaactgcattctcgagtcatatttaaacacttatagaattgtctgccatagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tccttagtaactgcattctcgagtcatatttaaacacttatagaattgtctgccatagat 518
Query: 61 taaagatggttgtccaagcttattggtaattaaagctattataattaatatctaacataa 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 taaagatggttggccaagcttattggtaattaaagctattataattaatatctaacataa 458
Query: 121 taatttcattaagacttgatttactaataatatcaataaaatcaatactactttaagggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 taatttcattaagacttgatttactaataatatcaataaaatcaatactactttaagggt 398
Query: 181 caatgcattgtcggatatgtcttacagtgttttttcttttctctcttttatattatttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 caatgcattgtcggatatgtcttacagtgttttttcttttctctcttttatattatttga 338
Query: 241 taaattattgcatcatttgtcttttaaaggtaatattttccacattcaatttaaggaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 taaattattgcatcatttgtcttttaaaggtaatattttccacattcaatttaaggaaaa 278
Query: 301 cctttctttggattgaggatatgaaaactcataatcctctatattgttctggagttcttt 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 277 cctttctttggattgaggatatgaaaacacataatcctctatattgttctggagttcttt 218
Query: 361 ttgggttttttgttttt 377
|||||||||||||||||
Sbjct: 217 ttgggttttttgttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
