Query= MSMg01no194_a11.b1 MSMg01no194_a11.b1 CHROMAT_FILE:
MSMg01no194_a11.b1 PHD_FILE: MSMg01no194_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:47 2005
(592 letters)
>mm_chr2_143063120_143064111
Length = 992
Score = 996 bits (515), Expect = 0.0
Identities = 571/597 (95%), Gaps = 15/597 (2%)
Strand = Plus / Plus
Query: 7 gaattcagtcagaaacctcctactccaacagaattgggcccctgcatgcaggaattgttc 66
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gaattcagtcagaaaccttctactccaacagaattgggcccctgcatgcaggaattgttc 259
Query: 67 aataaatgctatttgcttttgcatactttttgagtctggggtatcattcttcagctattt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aataaatgctatttgcttttgcatactttttgagtctggggtatcattcttcagctattt 319
Query: 127 atggaccctaacaatcctctttccatctttctcttacatctgcttccgtgatgtaagcac 186
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 320 atggaccctaacaatcctctttccatctttctcttacatctgcttccatgatgtaagcac 379
Query: 187 cgcc-ccccccatcaatgcttccaccaccatgagccatatgggatgtcctcccaaccttt 245
| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 380 ccccaccccccatcaatgcttccaccaccatgagccatatgagatgtcctcccaaccttt 439
Query: 246 cttcccttcagtttttttttt------ctgtcaggcattttggttacagcaacacaaaaa 299
||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 440 cttcccttcagttttttttttttttttctgtcaggcattttggtcacagcaacacaaaaa 499
Query: 300 tagctaatacaagtgacttaattaggactatgctggaacccagctgtctgtcatattatg 359
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 500 tagctaatacaagtgacttaattaggactatgctggaacccagctctctgtcatattatg 559
Query: 360 atttggtcaactctcccc----acctaagggtcacctagggaaacttcacgtatgttctt 415
|||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 560 atttggtcaactct----ttgtacctaagggtcacctagggaaacttcacatatgttctt 615
Query: 416 attactggaagatgtaggaaaacctgctctgaggggtcttagctctgtatagaaaaataa 475
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 616 attactggaagatgtaggaaaacctgctctgaggggtcttagctttgtatagaaaaataa 675
Query: 476 ttcaaaatagattcaggtgaaaactcaaggaaaattttattgacatttgagaaggaaaac 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 676 ttcaaaatagattcaggtgaaaactcaaggaaaattttattgacatttgagaagaaaaac 735
Query: 536 agtgggcatgagagctagagtttttagaagaaagggaggagggagaagctcatgaga 592
||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 736 agtgggcatgagagccagagtttttagaagaaagggaggagggagaagctcctgaga 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_a11.g1 MSMg01no194_a11.g1 CHROMAT_FILE:
MSMg01no194_a11.g1 PHD_FILE: MSMg01no194_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:47 2005
(332 letters)
>mm_chr2_143160076_143160807
Length = 732
Score = 629 bits (325), Expect = 0.0
Identities = 331/333 (99%), Gaps = 1/333 (0%)
Strand = Plus / Minus
Query: 1 cacacccctaagccccttaccccataaaaacccctagctttccagcctcgtggctgacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cacacccctaagccccttaccccataaaaacccctagctttccagcctcgtggctgacat 662
Query: 61 ccggtatctcctgtatgggatgcatgttggtccggagctgtcctcatgtaattacatcaa 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccggtatctcctgtgtgggatgcatgttggtccggagctgtcctcatgtaattacatcaa 602
Query: 121 gagatggtccttcgtga-ttttttgggtgcacgccgaatcggaattgggtgggggtttcc 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gagatggtccttcgtgatttttttgggtgcacgccgaatcggaattgggtgggggtttcc 542
Query: 180 ccactaggtctaacaggtcccctgagtttggaggaaagaaagtaagagggagagagtaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccactaggtctaacaggtcccctgagtttggaggaaagaaagtaagagggagagagtaga 482
Query: 240 agttgatagagcattgggaagccatccataaagcagggtactggcccaatgaactatcag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agttgatagagcattgggaagccatccataaagcagggtactggcccaatgaactatcag 422
Query: 300 atccttggttctctcacaaggagggaacaggga 332
|||||||||||||||||||||||||||||||||
Sbjct: 421 atccttggttctctcacaaggagggaacaggga 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|