CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCTCTCCAGCCCTAGCCTATCTTAATTTTCAAGTTCCAGGCTACT
GAGAGACCTGCTAAAAACAACAAAAGGTGGAAAGCACCCGGACAGCTGAT
GTTATCAGGATGTCTTCTGGCCTGCACAGGGACCCTTGCACATACACAGG
TACACACATATATACACACATAACTGGAGGACAATAGCTTCTATTTAATA
CCATTCACACTACAGATGTGATGTGCGTCTGAATCTAACCTGCATTTTAA
GCATGTTCTTGCGTCTTCAGCTGAGAGATCAACAAACCATGACATGTTAG
TCAGCTTTGACCTGTGCCTGTTTTTGTAGGTGAAGTTCATTGGATGTCTG
CATGCCTTCTCACTTAGGCATGGCTGAGCAGCTGTGACAGAGCCACAAAG
TCTGCAACATCCACTATCTGGTCTTGTATAGAAAATGCCTGCTGCTTCCG
TCTCAGTCGCTATAATCAGTAAAATGATAAGTTAACTGGTGAAACAAAAG
CACTCATCTGTAATGTTTGCTTATCTCAAGGCCGGTGCTAGTTACCACCA
TCACGGCCAAGTTCAAGTACTGACTTGTGAAATGAAGGGCTGGAAAGAGC
TTTCTGACATTTAACAGTCTCACTGTGCAAGTGCAATACATCTAAATCAA
TGCAGAGTATAGATTAAAATGTAGTANATACGGGCCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGATCCCCAGCAGCCACACACAAA
AAAGCTGGGGCCATAATATCCATTGGTAATCCCAGCTCTGGCGTGGTTAA
AACAGGAGGCGCCCTGGGGCTTGCCGGTCAGTCAGACCAGGCAGATCTGT
GAGTGCTAGGTTGAGACAAAGACCTTGTCTTAAAAAATATGTCGGAGAGT
GAATAAAGGGGACACCTGATGTTGGCTGCTGTCCTCCGCATGCATATGCG
CACATGCAAATACACATGCATATGCAAATGAGCACATACATATGCACACT
TGCAAGTGCCTATTTGTATTCTGCCCCCCTCGCGAACACAGAGACACATA
ACTAAGAATTGCTGTTGTTTTTTAAAAGTTCCCACAGTATGCCTTTCTTT
AAGCAAGTTCTATGTCCATGGAGGTATTTTAAAGAAAAACTTTCTTTAAT
GTGAAATAGACTAAGACCATTTACTTAAAGACATGGTTTCCTGTATATCC
CTGGATGGTCTGGAACTTGATGTGTAGACCAGGCTAGCCTCTAATTCATA
GGCTGCCCGCCTCTACCTCTCAAGTGTTGTGATTCAAGGTATATGACACC
ATGTCTGGCTTTTTGTTGTTTTGATTGTTGAATAGCAATTGCTTAATGAA
GGCGGTCTGCGTGTCCTTATAACAACATTCTAGTTGGTT

Query= MSMg01no194_l13.b1 MSMg01no194_l13.b1 CHROMAT_FILE:
MSMg01no194_l13.b1 PHD_FILE: MSMg01no194_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:41 2005
         (692 letters)



>mm_chr2_105199861_105200952
          Length = 1092

 Score = 1317 bits (681), Expect = 0.0
 Identities = 686/688 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctctccagccctagcctatcttaattttcaagttccaggctactgagagacct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctctccagccctagcctatcttaattttcaagttccaggctactgagagacct 264

                                                                       
Query: 65  gctaaaaacaacaaaaggtggaaagcacccggacagctgatgttatcaggatgtcttctg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctaaaaacaacaaaaggtggaaagcacccggacagctgatgttatcaggatgtcttctg 324

                                                                       
Query: 125 gcctgcacagggacccttgcacatacacaggtacacacatatatacacacataactggag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcctgcacagggacccttgcacatacacaggtacacacatatatacacacataactggag 384

                                                                       
Query: 185 gacaatagcttctatttaataccattcacactacagatgtgatgtgcgtctgaatctaac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gacaatagcttctatttaataccattcacactacagatgtgatgtgcgtctgaatctaac 444

                                                                       
Query: 245 ctgcattttaagcatgttcttgcgtcttcagctgagagatcaacaaaccatgacatgtta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgcattttaagcatgttcttgcgtcttcagctgagagatcaacaaaccatgacatgtta 504

                                                                       
Query: 305 gtcagctttgacctgtgcctgtttttgtaggtgaagttcattggatgtctgcatgccttc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtcagctttgacctgtgcctgtttttgtaggtgaagttcattggatgtctgcatgccttc 564

                                                                       
Query: 365 tcacttaggcatggctgagcagctgtgacagagccacaaagtctgcaacatccactatct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcacttaggcatggctgagcagctgtgacagagccacaaagtctgcaacatccactatct 624

                                                                       
Query: 425 ggtcttgtatagaaaatgcctgctgcttccgtctcagtcgctataatcagtaaaatgata 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggtcttgtatagaaaatgcctgctgcttccgtctcagtcgctataatcagtaaaatgata 684

                                                                       
Query: 485 agttaactggtgaaacaaaagcactcatctgtaatgtttgcttatctcaaggccggtgct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 685 agttaactggtgaaacaaaagcactcatctgtaatgtttgcttatctcaaggctggtgct 744

                                                                       
Query: 545 agttaccaccatcacggccaagttcaagtactgacttgtgaaatgaagggctggaaagag 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agttaccaccatcacggccaagttcaagtactgacttgtgaaatgaagggctggaaagag 804

                                                                       
Query: 605 ctttctgacatttaacagtctcactgtgcaagtgcaatacatctaaatcaatgcagagta 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctttctgacatttaacagtctcactgtgcaagtgcaatacatctaaatcaatgcagagta 864

                                       
Query: 665 tagattaaaatgtagtanatacgggcct 692
           ||||||||||||||||| ||||||||||
Sbjct: 865 tagattaaaatgtagtaaatacgggcct 892


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space:   737924
Effective search space used:   737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)