Query= MSMg01no195_i09.b1 MSMg01no195_i09.b1 CHROMAT_FILE:
MSMg01no195_i09.b1 PHD_FILE: MSMg01no195_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:47 2005
(329 letters)
>mm_chr2_57979850_57980578
Length = 729
Score = 590 bits (305), Expect = e-173
Identities = 311/313 (99%)
Strand = Plus / Plus
Query: 17 gaattctcactctacgagttcagaggagaattggaacctgaacagcaacttatttgtatg 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattctcactctacgagttcagaggagaattggaacctgaacagcaacttatttgtatg 276
Query: 77 gttttgagacactaagcagacccacacttgtgcctggtcatgtgatcctgctcattctcc 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gttttgagacactaagcagacccacacttgtgcctggtcatgtgatcctgctcattctcc 336
Query: 137 acatttgccataatttattgagtcatggtcaaaaattaatgactgtaaggcctcaaaaaa 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 acatttgccataatttattgagtcatggtcaaaaattaatgactgtaaggcctcaaaaaa 396
Query: 197 gtaggtaacatttggtttgatttagttatttgcagaagtaagattgaacatagaaccttg 256
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 397 gtaggtaacatttggttggatttagttagttgcagaagtaagattgaacatagaaccttg 456
Query: 257 tgcatattaggcaacaaccctcccccctgatttatatccctagcaccatggtatcacaca 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgcatattaggcaacaaccctcccccctgatttatatccctagcaccatggtatcacaca 516
Query: 317 tgtctcaagcagt 329
|||||||||||||
Sbjct: 517 tgtctcaagcagt 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_i09.g1 MSMg01no195_i09.g1 CHROMAT_FILE:
MSMg01no195_i09.g1 PHD_FILE: MSMg01no195_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:47 2005
(286 letters)
>mm_chr2_58133337_58134021
Length = 685
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 1 tgcttagattaagggtgacagttctgattattctgatgcccacatgactattttgagtca 60
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgcttaga-tgagggtgacagttctgattattctgatgcccacatgactattttgagtca 427
Query: 61 cttgaaaattatctgattggagtctggaggcagctggtatccctacacttaccccagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cttgaaaattatctgattggagtctggaggcagctggtatccctacacttaccccagaga 367
Query: 121 agctaaatggcttgccaaggcagcaggtctgtgagccttctgtttcccaagctttccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agctaaatggcttgccaaggcagcaggtctgtgagccttctgtttcccaagctttccttc 307
Query: 181 ctctttctcccgtgatgtaaactgcaacaccagactaaatagagtggagaaatgagtagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 306 ctctttctcccgtgatgtaaactgcaacaccagactaaatagagtggagaaatgagtggt 247
Query: 241 agctcacctcttgtccacgactgctctgcagagcctaggaattcgt 286
||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 246 agctcacctcttgcccacgactgctctgcagagcctaggaattcgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
