Query= MSMg01no197_l20.b1 MSMg01no197_l20.b1 CHROMAT_FILE:
MSMg01no197_l20.b1 PHD_FILE: MSMg01no197_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:44 2005
(315 letters)
>mm_chr2_43764676_43765390
Length = 715
Score = 567 bits (293), Expect = e-166
Identities = 305/309 (98%)
Strand = Plus / Minus
Query: 7 attctctgatctttagttcttatcttttatacatttgcctttgactttaatcattaatcc 66
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 515 attctctgatctttagttcttatcttttatacgtctgcctttgactttaatcattaatcc 456
Query: 67 aaaaatttcacatcctaaacacttctgaactaattttaaaatagctatgaattggtatgc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aaaaatttcacatcctaaacacttctgaactaattttaaaatagctatgaattggtatgc 396
Query: 127 aggttgacatatgttattgaataacctgaactctagttccatattcaacagtgtttaatc 186
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 395 aggttgacatatgttattgaataacctgaactctagttccatattcaacaatgtttaatc 336
Query: 187 aaagaacttcagtgattcctttaaatgagccattatatcagcaccaatgaaggaaaataa 246
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 335 aaagaacttcagtgattcctttaaatgagccattatatcagcaccaatgaaagaaaataa 276
Query: 247 taaaagtgtgggaaatgtgattttatgtctgtaaaggtgtgatgtaattcactctatcat 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 taaaagtgtgggaaatgtgattttatgtctgtaaaggtgtgatgtaattcactctatcat 216
Query: 307 aacaatatc 315
|||||||||
Sbjct: 215 aacaatatc 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no197_l20.g1 MSMg01no197_l20.g1 CHROMAT_FILE:
MSMg01no197_l20.g1 PHD_FILE: MSMg01no197_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:44 2005
(289 letters)
>mm_chr2_43628066_43628753
Length = 688
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 tgattacacattacattcactgcttgttggactgttgcatggtgagcaggtgaaattgag 60
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 tgattacacatcacattcactgcttgttggactgttgcatggtgag-aggtgaaattgag 259
Query: 61 ctcagagcaccacagaattgagtctgaggagcaaagccagcgcttgtgtggcttttatga 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 260 ctcagagcaccacagaattgagtctgaggagcaaagccagtgcttgtgtggcttttatga 319
Query: 121 agtgtttcctcatcgctgcttcctgtttttaaaacaggactcaaagtggaacttgagcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agtgtttcctcatcgctgcttcctgtttttaaaacaggactcaaagtggaacttgagcga 379
Query: 181 taccacaagatactcacgctttcctttagtacatacgaaatcaggaagtctagaggactt 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 380 taccacaagatactcacgctttcccttagtacatacgaaatcaggaagtctagaggactt 439
Query: 241 ggtaaaccaggcttaagggattgattgccacttaaatttctaaattg 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggtaaaccaggcttaagggattgattgccacttaaatttctaaattg 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
