Query= MSMg01no197_p23.b1 MSMg01no197_p23.b1 CHROMAT_FILE:
MSMg01no197_p23.b1 PHD_FILE: MSMg01no197_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:04 2005
(355 letters)
>mm_chr2_114084425_114085179
Length = 755
Score = 625 bits (323), Expect = 0.0
Identities = 347/355 (97%)
Strand = Plus / Minus
Query: 1 tatatcatgaaaggatgccttgtgcattctgtaccttccactattctgtgaccttccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tatatcatgaaaggatgccttgtgcattctgtaccttccactattctgtgaccttccctc 496
Query: 61 tgctcagggatgtgtgtgggactaaagagctcctgcatacagagagaaacccactggctt 120
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 495 tgctcagggatgtatgtgggactaaagagctcctgcatacagaaagaaacccactggctt 436
Query: 121 aagccatgccctcggcaaatctggatgctgaaaagcagaaattagcctgtcaaacaagca 180
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aagccttgccctcagcaaatctggatgctgaaaagcagaaattagcctgtcaaacaagca 376
Query: 181 tgtgtgtaagttctacacatggactccatcagcacatatctgtgggctttgtttgccttt 240
||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 375 tgtgtgtaagttctatacatggactccatcagtacatatctgtgggctttatttgccttt 316
Query: 241 accatgtgtaagaaaggctcaattcaatacaggacacacctgtgaagtgaaagggcctct 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 accatgtgcaagaaaggctcaattcaatacaggacacacctgtgaagtgaaagggcctct 256
Query: 301 ccctccacagaagttcctatgaggtatacagataaataaagacaggattgtagaa 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ccctccacagaagttcctatgaggtatacagataaataaagacaggattgtagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no197_p23.g1 MSMg01no197_p23.g1 CHROMAT_FILE:
MSMg01no197_p23.g1 PHD_FILE: MSMg01no197_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:04 2005
(157 letters)
>mm_chr2_113944953_113945511
Length = 559
Score = 257 bits (133), Expect = 2e-73
Identities = 152/159 (95%), Gaps = 2/159 (1%)
Strand = Plus / Plus
Query: 1 tctttgtattttgctatgactgagtaggtagaatatttagttacattcctatcatgaga- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttgtattttgctatgactgagtaggtagaatatttagttacattcctatcatgagag 260
Query: 60 -agggggggatataaaaatagtaggagtaaggaaaatgacttcgaaggcagcaatcttgg 118
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 gggggggggatataagaatagtaggagtaaggaaaatgacttcaaaggcagcaatcttgg 320
Query: 119 ctttagcttggagttgtttacaaagaaaacggaaccata 157
|||||||||||||||||||||||||||||| ||| ||||
Sbjct: 321 ctttagcttggagttgtttacaaagaaaacagaatcata 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 559
Length adjustment: 8
Effective length of query: 149
Effective length of database: 551
Effective search space: 82099
Effective search space used: 82099
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
