Query= MSMg01no201_e15.b1 MSMg01no201_e15.b1 CHROMAT_FILE:
MSMg01no201_e15.b1 PHD_FILE: MSMg01no201_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:21 2005
(542 letters)
>mm_chr2_82162483_82163426
Length = 944
Score = 787 bits (407), Expect = 0.0
Identities = 417/421 (99%), Gaps = 2/421 (0%)
Strand = Plus / Minus
Query: 22 tcagtgttttcataggacttaccacaacactttatttcacagttcaaaatacttgacact 81
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 421 tcagtgttttcataggacttaccacaacactttatatcacagttcaaaatacttgacact 362
Query: 82 attggtatgacagattctggacggcaagaaatcaagaaaacacaaacaagatggaaaaac 141
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attggtatgacagattctggatggcaagaaatcaagaaaacacaaacaagatggaaaaac 302
Query: 142 aaacttcaggacattgaagcagaaaaggtt--aaaaaaaaagaatatggactttcttatg 199
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 301 aaacttcaggacattgaagcagaaaaggttaaaaaaaaaaagaatatggactttcttatg 242
Query: 200 tatcctgcagcattaagaatttcactgtctgttccacactttgtctctggatcttctccc 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatcctgcagcattaagaatttcactgtctgttccacactttgtctctggatcttctccc 182
Query: 260 atgggtactttgatccctcttctaagaaggaccaaagaatccacactgtggtcttccttc 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgggtactttgatccctcttctaagaaggaccaaagaatccacactgtggtcttccttc 122
Query: 320 ttaaacctcatatagtccgggaattgtaggctgggtattcagaacttctgggctaatatc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaaacctcatatagtccgggaattgtaggctgggtattcagaacttctgggctaatatc 62
Query: 380 cgcttatcagtgagtgcataccatgtgtgctcttttgtgattgggttacctcactcaggt 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcttatcagtgagtgcataccatgtgtgctcttttgtgattgggttacctcactcaggt 2
Query: 440 t 440
|
Sbjct: 1 t 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 944
Length adjustment: 10
Effective length of query: 532
Effective length of database: 934
Effective search space: 496888
Effective search space used: 496888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_e15.g1 MSMg01no201_e15.g1 CHROMAT_FILE:
MSMg01no201_e15.g1 PHD_FILE: MSMg01no201_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:21 2005
(262 letters)
>mm_chr2_82079920_82080581
Length = 662
Score = 344 bits (178), Expect = 3e-99
Identities = 199/206 (96%), Gaps = 3/206 (1%)
Strand = Plus / Plus
Query: 1 acatatgtcaacaacgctgatgagggcctacttcatagctcatgcagaagtctaaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatatgtcaacaacgctgatgagggcctacttcatagctcatgcagaagtctaaaacaa 260
Query: 61 agat-acatgcactgtgttgtagtgattggttatgctatgctccagacctatgcaaagct 119
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatga-atgcactgtgttgtagtgattggttatgctatgctccagacctatgcaaagct 319
Query: 120 ggaagtgatctagtttgaatcagcttacagtgtacagattctctctctctctctctctct 179
|||||||||| |||||||||||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 320 ggaagtgatccagtttgaatcagtttacagcatacagat-ctctctctctctctctctct 378
Query: 180 ctctctctctctctctctctctctct 205
||||||||||||||||||||||||||
Sbjct: 379 ctctctctctctctctctctctctct 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 77
Number of extensions: 35
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 662
Length adjustment: 9
Effective length of query: 253
Effective length of database: 653
Effective search space: 165209
Effective search space used: 165209
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
