Query= MSMg01no201_e16.b1 MSMg01no201_e16.b1 CHROMAT_FILE:
MSMg01no201_e16.b1 PHD_FILE: MSMg01no201_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:21 2005
(515 letters)
>mm_chr2_82162496_82163412
Length = 917
Score = 725 bits (375), Expect = 0.0
Identities = 400/411 (97%), Gaps = 8/411 (1%)
Strand = Plus / Minus
Query: 9 tcagtgttttcataggac---cctattcaacactttatttcacagttcaaaatacttgac 65
|||||||||||||||||| || | ||||||||||| |||||||||||||||||||||
Sbjct: 408 tcagtgttttcataggacttacc-a--caacactttatatcacagttcaaaatacttgac 352
Query: 66 actcttggtatgacagattctggatgccaagaaatcaagaaaacacaaacaagatggaaa 125
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 351 actattggtatgacagattctggatggcaagaaatcaagaaaacacaaacaagatggaaa 292
Query: 126 aacaaacttcaggacattgaagcagaaaaggtt--aaaaaaaaagaatatggactttctt 183
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 291 aacaaacttcaggacattgaagcagaaaaggttaaaaaaaaaaagaatatggactttctt 232
Query: 184 atgtatcctgcagcattaagaatttcactgtctgttccacactttgtctctggatcttct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atgtatcctgcagcattaagaatttcactgtctgttccacactttgtctctggatcttct 172
Query: 244 cccatgggtactttgatccctcttctaagaaggaccaaagaatccacactgtggtcttcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cccatgggtactttgatccctcttctaagaaggaccaaagaatccacactgtggtcttcc 112
Query: 304 ttcttaaacctcatatagtccgggaattgtaggctgggtattcagaacttctgggctaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ttcttaaacctcatatagtccgggaattgtaggctgggtattcagaacttctgggctaat 52
Query: 364 atccgcttatcagtgagtgcataccatgtgtgctcttttgtgattgggtta 414
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atccgcttatcagtgagtgcataccatgtgtgctcttttgtgattgggtta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 917
Length adjustment: 10
Effective length of query: 505
Effective length of database: 907
Effective search space: 458035
Effective search space used: 458035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_e16.g1 MSMg01no201_e16.g1 CHROMAT_FILE:
MSMg01no201_e16.g1 PHD_FILE: MSMg01no201_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:21 2005
(265 letters)
>mm_chr2_82079921_82080585
Length = 665
Score = 350 bits (181), Expect = e-101
Identities = 199/205 (97%), Gaps = 3/205 (1%)
Strand = Plus / Plus
Query: 1 catatgtcaacaacgctgatgagggcctacttcatagctcatgcagaagtctaaaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catatgtcaacaacgctgatgagggcctacttcatagctcatgcagaagtctaaaacaaa 260
Query: 61 gat-acatgcactgtgttgtagtgattggttatgctatgctccagacctatgcaaagctg 119
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatga-atgcactgtgttgtagtgattggttatgctatgctccagacctatgcaaagctg 319
Query: 120 gaagtgatctagtttgaatcagtttacagtgtacagattctctctctctctctctctctc 179
||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 320 gaagtgatccagtttgaatcagtttacagcatacagat-ctctctctctctctctctctc 378
Query: 180 tctctctctctctctctctctctct 204
|||||||||||||||||||||||||
Sbjct: 379 tctctctctctctctctctctctct 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 33
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 665
Length adjustment: 9
Effective length of query: 256
Effective length of database: 656
Effective search space: 167936
Effective search space used: 167936
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
