Query= MSMg01no202_d17.b1 MSMg01no202_d17.b1 CHROMAT_FILE:
MSMg01no202_d17.b1 PHD_FILE: MSMg01no202_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:58 2005
(348 letters)
>mm_chr2_58769728_58770475
Length = 748
Score = 650 bits (336), Expect = 0.0
Identities = 345/348 (99%)
Strand = Plus / Minus
Query: 1 gctgtggcccttgggcacactctctaaatatgtactttctttgtctaaacttaaaaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gctgtggcccttgggcacactctctaaatatgtactttctttgtctaaacttaaaaggca 489
Query: 61 aactttggtgattacaaaatattttatgtcagttgtaaaaatacagacaagcacaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactttggtgattacaaaatattttatgtcagttgtaaaaatacagacaagcacaaaaaa 429
Query: 121 tactatgaaaaccaccccaaacttgcatagctcccaaaagaaaattgttaacaacaatgg 180
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 428 tactatgaaaaccaccccaaacttgcatagctcccaaaagaaagttattaacaacaatgg 369
Query: 181 ccttcaacatttttacatacataaatgtattattttaaatgctatttctcttacttgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ccttcaacatttttacatacataaatgtattattttaaatgctatttctcttacttgtca 309
Query: 241 atatatcaatatgtcagtatatgtgtagttcccttttttttcctacgtagggtttattgc 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 308 atatatcaatatgtcagtatatgtgtagttcccttttttttcctacatagggtttattgc 249
Query: 301 ttgtgtactgtttcattgaatggctcttttgataatcttacaatttgg 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttgtgtactgtttcattgaatggctcttttgataatcttacaatttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no202_d17.g1 MSMg01no202_d17.g1 CHROMAT_FILE:
MSMg01no202_d17.g1 PHD_FILE: MSMg01no202_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:58 2005
(283 letters)
>mm_chr2_58670289_58670971
Length = 683
Score = 513 bits (265), Expect = e-150
Identities = 280/287 (97%), Gaps = 4/287 (1%)
Strand = Plus / Plus
Query: 1 caggacagtcagggctatacagagaaaccttgtctcgaaaaaaacaacacaaaaaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 197 caggacagtcagggctatacagagaaaccttgtctcgaaaaaaacaaaacaaaaaaacaa 256
Query: 61 acaaacaaaaaaacccaaccaac----caaacaaaaaaaccccaaaagatgcccctaaac 116
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 257 acaaacaaaaaaacccaaccaaccaaacaaacaaaaaaaccccaaaagatgcccctaaac 316
Query: 117 caatgaaaaataaacctataaaacttaaggatgtccccatgggtgaccacagtaaagtgc 176
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 317 caatgaaaaataaacctataaagcttaaggatgtccccatgggtgaccacagtaaagtgc 376
Query: 177 aatcagcctaaaggctacaatcccagaatactcccgtgtatagagctgggggagagacgg 236
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 377 aatcagcctaaaggctacaatcccagaatactcctgtgtatagagctgggggagagacgg 436
Query: 237 ccaaggaaactgagacacagccaacatagcaggaaggaaaacaggta 283
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ccaaggaaactgagacacagccaacatagcaggaaggaaaacaggta 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
