Query= MSMg01no202_g07.b1 MSMg01no202_g07.b1 CHROMAT_FILE:
MSMg01no202_g07.b1 PHD_FILE: MSMg01no202_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:11 2005
(538 letters)
>mm_chr2_145344863_145345799
Length = 937
Score = 963 bits (498), Expect = 0.0
Identities = 528/538 (98%), Gaps = 1/538 (0%)
Strand = Plus / Plus
Query: 1 cagggtgttgcctttcttcctgcaggctagagcttttgtagtctataccacccttgaata 60
||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 201 cagggtgttgcctttcttcctgcaggctagagcttttgtagtctagaggagccttgaata 260
Query: 61 cccaagtcaacctcaggagtccattctaatgccagggagcatcctggcagagccactgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaagtcaacctcaggagtccattctaatgccagggagcatcctggcagagccactgtc 320
Query: 121 ctttctgaatgctgttatctctctaatagtctcagggatttgttcagaagtcgccagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttctgaatgctgttatctctctaatagtctcagggatttgttcagaagtcgccagagt 380
Query: 181 gtgagactattgggcagccaaggttagagcctgaagccaaggttagagtgggacatacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgagactattgggcagccaaggttagagcctgaagccaaggttagagtgggacatacag 440
Query: 241 cttccctgtggctctcagagcctagtttcctcagagaagtagtcattattatatgagatc 300
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 441 cttccctgtggctctcagagcctagtttcctcagagaagtagtcactag-atatgagatc 499
Query: 301 ctcagttctctgacaaaacacccaagactcagtatcttctaggaaaacctatttctacta 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 500 ctcagttctctgacaaaacacccaagactcagtatcttctagaaaaacctatttctacta 559
Query: 361 ttctagctgtgactctatttaaaatattgagggagccgaaatccgcttcacctgatcagg 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 560 ttctagctgtgactctatttaaaatactgagggagccgaaatccgcttcacctgatcagg 619
Query: 421 aagctcagtgtggtctgttttgtgccctggggaaagtgtctgcttggtgtaaagtccaat 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aacctcagtgtggtctgttttgtgccctggggaaagtgtctgcttggtgtaaagtccaat 679
Query: 481 cctggtgagcttttctctcaagtgtgtcaggcctgtgtgtctctcagaagctgctggg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cctggtgagcttttctctcaagtgtgtcaggcctgtgtgtctctcagaagctgctggg 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 937
Length adjustment: 10
Effective length of query: 528
Effective length of database: 927
Effective search space: 489456
Effective search space used: 489456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no202_g07.g1 MSMg01no202_g07.g1 CHROMAT_FILE:
MSMg01no202_g07.g1 PHD_FILE: MSMg01no202_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:11 2005
(283 letters)
>mm_chr2_145424746_145425428
Length = 683
Score = 507 bits (262), Expect = e-148
Identities = 277/282 (98%)
Strand = Plus / Minus
Query: 1 ttccatgagagcaagagctgttattcgcagttttatttgagttttgccgttttgaacatc 60
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 482 ttccatgagagcaagagctgttattcgcagttttatttgagtcctgctgttttgaacatc 423
Query: 61 tggaatggtgggaaagccgaggcctcagcagaaacaatctccttagcttctatatttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tggaatggtgggaaagccgaggcctcagcagaaacaatctccttagcttctatatttggt 363
Query: 121 gtgactcaggggtagaggcttgcttgttaccttactgtccacaagtctgctgtgcagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gtgactcaggggtagaggcttgcttgttaccttactgtccacaagtctgctgtgcagctg 303
Query: 181 tgtgctttatggtgaccaggtgagagggtgtcatggctacagagaaaccttgctgacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgtgctttatggtgaccaggtgagagggtgtcatggctacagagaaaccttgctgacaac 243
Query: 241 attcctctattcccttctcctttagattctatctgtgtttga 282
||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 242 attcctcaattcccttatcctttagattctatctgtgtttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
