Query= MSMg01no204_f15.b1 MSMg01no204_f15.b1 CHROMAT_FILE:
MSMg01no204_f15.b1 PHD_FILE: MSMg01no204_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:51 2005
(276 letters)
>mm_chr2_166957634_166958308
Length = 675
Score = 482 bits (249), Expect = e-140
Identities = 261/265 (98%), Gaps = 1/265 (0%)
Strand = Plus / Minus
Query: 5 gaattcttccatcaccagtgtcatcggggctgtggtagccagtgacttgcttctgctccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gaattcttccatcaccagtgtcatcggggctgtggtagccagtgacttgcttctgctccc 409
Query: 65 atgccctgtgttgcccatgcctcagctcagggcggcaagacgtccattagcagagtgtca 124
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 408 atgccctgtgttggccatgcctcagctcagggcggcaagacgtccattagcaga-tgtca 350
Query: 125 ttctgacatctctgccttcgctctggctagcaggaaattttcagctcggttcaggtcagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttctgacatctctgccttcgctctggctagcaggaaattttcagctcggttcaggtcagc 290
Query: 185 cctcagccacagtcaggtccatctctctcactttgacatggagggcaaaatacctaggct 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 289 cctcagccacagtcaggtccatctctctcactttgacatggagggtaaaatacctaggct 230
Query: 245 ttggactggggaccaggctggagcc 269
|||||||| ||||||||||||||||
Sbjct: 229 ttggactgaggaccaggctggagcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 675
Length adjustment: 9
Effective length of query: 267
Effective length of database: 666
Effective search space: 177822
Effective search space used: 177822
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no204_f15.g1 MSMg01no204_f15.g1 CHROMAT_FILE:
MSMg01no204_f15.g1 PHD_FILE: MSMg01no204_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:51 2005
(124 letters)
>mm_chr2_166865649_166866173
Length = 525
Score = 234 bits (121), Expect = 1e-66
Identities = 124/125 (99%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 1 aaggcggcactagcccaggtgctggcaggttcagggttaatagtgacaaggatcaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggcggcactagcccaggtgctggcaggttcagggttaatagtgacaaggatcaggaag 260
Query: 61 aacccaaccctgaggatgaatggtctggctaggcctctctgcacagtga-gcctgagttg 119
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 aacccaaccctgaggatgaatggtctggctaggcctctctgcacagtgatgcctgagttg 320
Query: 120 acagg 124
|||||
Sbjct: 321 acagg 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 525
Length adjustment: 8
Effective length of query: 116
Effective length of database: 517
Effective search space: 59972
Effective search space used: 59972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
