Query= MSMg01no206_f23.b1 MSMg01no206_f23.b1 CHROMAT_FILE:
MSMg01no206_f23.b1 PHD_FILE: MSMg01no206_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:32 2005
(685 letters)
>mm_chr2_99531497_99532582
Length = 1086
Score = 1237 bits (640), Expect = 0.0
Identities = 671/682 (98%), Gaps = 4/682 (0%)
Strand = Plus / Plus
Query: 8 ttccaggacagccaagactatacagagaatccctgtctcaaaaaacc--aaaacaaacaa 65
|||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 205 ttccaggacagccaaggctatacagagaaaccctgtctcaaaaaaccaaaaaacaaacaa 264
Query: 66 acaaacaaacaaacaagcaaacaaac-aaaaagtaattaagatcacagactaactatatt 124
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 acaaacaaacaaacaaacaaacaaacaaaaaagtaattaagatcacagactaactatatt 324
Query: 125 aaagtagtatttcaaggtacaacttataaaaatacagataactacatgttaattaactta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagtagtatttcaaggtacaacttataaaaatacagataactacatgttaattaactta 384
Query: 185 agttaagatacaattttcacagtatgtaatataaaga-tttattataagtgtttaatggt 243
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 385 agttaagatacaattttcacagtatgtaatataaagatttttttataagtgtttaatggt 444
Query: 244 gaatcttactatcagaaaatgtaagaatgaataattgaaatatcattattactcatatag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaatcttactatcagaaaatgtaagaatgaataattgaaatatcattattactcatatag 504
Query: 304 agtgtgtaatgaaactttatttagatcactaaaagtatgtgcttatgtatgtcatttcta 363
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtgtgtaatggaactttatttagatcactaaaagtatgtgcttatgtatgtcatttcta 564
Query: 364 tgataagtaaaccattttgatttgataagtaaaagtttgatttttccttacaggttcaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgataagtaaaccattttgatttgataagtaaaagtttgatttttccttacaggttcaca 624
Query: 424 gttctgtaagttggaagtcttgcctttccttgacttcacactttcaaaactcatggtgcc 483
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtactgtaagttggaagtcttgcctttccttgacttcacactttcaaaactcatggtgcc 684
Query: 484 tcatcattttcttataaagggcatggcctttatatgaaatagagttacttatttgagcaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcatcattttcttataaagggcatggcctttatatgaaatagagttacttatttgagcaa 744
Query: 544 aagtataagtcttgcttttttgaggaagatatgggaagctaacatgatgttctgccgagt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aagtataagtcttgcttttttgaggaagatatgggaagctaacatgatgttctgccgagt 804
Query: 604 cctgcatggccattgaagggacagcatggcatggtccctagccctggagcagagtccgaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cctgcatggccattgaagggacagcatggcatggtccctagccctggagcagagtccgaa 864
Query: 664 gggtgtatgcctccttgagtgt 685
||||||||||||| ||||||||
Sbjct: 865 gggtgtatgcctctttgagtgt 886
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1086
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1076
Effective search space: 726300
Effective search space used: 726300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no206_f23.g1 MSMg01no206_f23.g1 CHROMAT_FILE:
MSMg01no206_f23.g1 PHD_FILE: MSMg01no206_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:32 2005
(314 letters)
>mm_chr2_99553928_99554643
Length = 716
Score = 590 bits (305), Expect = e-173
Identities = 312/315 (99%), Gaps = 2/315 (0%)
Strand = Plus / Minus
Query: 1 atggcagc--tgtgtagcatttggatagattgtctcacactagttctttgggacaaaact 58
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atggcagctgtgtgtagcatttggatagattgtctcacactagttctttgggacaaaact 380
Query: 59 tgctccccaaactgcaatttagcagactgctgcaacgtaagttgaaaatgcctaaggcac 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgctccccaaactgcaatttagcagactgctgcaacgtaagttgaaaatgcctaaggcac 320
Query: 119 attttattccactgtctagaagtaatattatgtgggagatggatgagagtacacaaagaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 attttattccactgtctagaagtaatattatgtgggagatggatgagagtacacaaagaa 260
Query: 179 gagggagaatagaacaaaaatattagacagtataggttgttaaaattgagaaacataatg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gagggagaatagaacaaaaatattagacagtataggttgttaaaattgagaaacataatg 200
Query: 239 aaagaaagaaaaaggaaggaatgaggaaggaaggaaggaaggaaggaaggaaggaaggaa 298
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 199 aaagaaagaaaaaggaaggaatgaggaaggaatgaaggaaggaaggaaggaaggaaggaa 140
Query: 299 ggaaggaaggaagga 313
|||||||||||||||
Sbjct: 139 ggaaggaaggaagga 125
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 716
Length adjustment: 9
Effective length of query: 305
Effective length of database: 707
Effective search space: 215635
Effective search space used: 215635
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
