| Query= MSMg01no207_i08.g1 MSMg01no207_i08.g1 CHROMAT_FILE:
MSMg01no207_i08.g1 PHD_FILE: MSMg01no207_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:34 2005
(281 letters)
>mm_chr2_65682151_65682831
Length = 681
Score = 472 bits (244), Expect = e-137
Identities = 277/306 (90%), Gaps = 28/306 (9%)
Strand = Plus / Minus
Query: 1 agtgggcaaaggctcttgctcccaaacctggcaacctgagtttaatccccgggctccatg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 620 agtgggcaaaggctcttgctcccaaacctgacaacctgagtttaatccccgggctccatg 561
Query: 61 tattagaaagagacaatgacttcttgaaaactgaactcagatatctacaccagtgccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tattagaaagagacaatgacttcttgaaaactgaactcagatatctacaccagtgccatg 501
Query: 121 gcatggga----------------------------acacacacacacacttaatataaa 152
|||||||| ||||||||||||||||||||||||
Sbjct: 500 gcatgggaacacacatacacacacacacacacacacacacacacacacacttaatataaa 441
Query: 153 atgtaaaactcgctgctgattgcagtcatttgatgagatattctaagaaagcttccttga 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgtaaaactcgctgctgattgcagtcatttgatgagatattctaagaaagcttccttga 381
Query: 213 gaagacatgaattgatggttgttttctttttatttgtggtgtgtgtgtgtgtgtgtgtgt 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaagacatgaattgatggttgttttctttttatttgtggtgtgtgtgtgtgtgtgtgtgt 321
Query: 273 gtgtgt 278
||||||
Sbjct: 320 gtgtgt 315
Score = 56.8 bits (29), Expect = 1e-12
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 247 tgtg-gtgtgtgtgtgtgtgtgtgtgtgtgtgt 278
|||| ||||||||||||||||||||||||||||
Sbjct: 452 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 484
Score = 54.9 bits (28), Expect = 6e-12
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 251 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 278
||||||||||||||||||||||||||||
Sbjct: 451 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 5
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
