Query= MSMg01no209_a13.b1 MSMg01no209_a13.b1 CHROMAT_FILE:
MSMg01no209_a13.b1 PHD_FILE: MSMg01no209_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:02 2005
(126 letters)
>mm_chr2_84488050_84488575
Length = 526
Score = 215 bits (111), Expect = 9e-61
Identities = 117/119 (98%)
Strand = Plus / Minus
Query: 4 ggaattcagttagtttctttgttacgtgagtaaggtagtgggtctgagtttcaggtgtgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggaattcagttagtttctttgttacgtgagtaaggtagtgggtctgagtttcaggtgtgt 263
Query: 64 gtggttggttacctagagtgctagtgcctttcttaggattccggtatggaggggggggg 122
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtggttggttagatagagtgctagtgcctttcttaggattccggtatggaggggggggg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 526
Length adjustment: 8
Effective length of query: 118
Effective length of database: 518
Effective search space: 61124
Effective search space used: 61124
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no209_a13.g1 MSMg01no209_a13.g1 CHROMAT_FILE:
MSMg01no209_a13.g1 PHD_FILE: MSMg01no209_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:02 2005
(287 letters)
>mm_chr2_84341524_84342210
Length = 687
Score = 511 bits (264), Expect = e-149
Identities = 279/284 (98%), Gaps = 1/284 (0%)
Strand = Plus / Plus
Query: 1 caggacaacctggtctacacagatcaagttccaggacagcaagggctgcacagagaaacc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 202 caggacaacctggtctacacagatcgagttccaggacagcaagggctgcacagagaaacc 261
Query: 61 ctgtctcaaaaaaaacaacaaaaataaataagaaacaagctaataaaaatatgatataca 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctgtctcaaaaaaa-caacaaaaataaataagaaacaagctaataaaaatatgatataca 320
Query: 121 tataaaatgaaataccgggaaaccattaaaaagaaaataattctgtcacatgccacaatg 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tataaaatgaaataccgggaaaccattaaaaagaaaatagttctgtcacatgccacaatg 380
Query: 181 cagataaatgtctggtgttatgccagggaatagttagtgatcaccaaaaacatacacagg 240
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagataattgtctggtgttatgtcagggaatagttagtgatcaccaaaaacatacacagg 440
Query: 241 agccaatctgatgcaactcacagcaggtctttattctattcgag 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agccaatctgatgcaactcacagcaggtctttattctattcgag 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
