Query= MSMg01no210_i14.b1 MSMg01no210_i14.b1 CHROMAT_FILE:
MSMg01no210_i14.b1 PHD_FILE: MSMg01no210_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:07 2005
(193 letters)
>mm_chr2_114084523_114085115
Length = 593
Score = 311 bits (161), Expect = 1e-89
Identities = 185/193 (95%)
Strand = Plus / Minus
Query: 1 cagggatgtgtgtgggactaaagagctcctgcatacagagagaaacccactggcttaagc 60
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 393 cagggatgtatgtgggactaaagagctcctgcatacagaaagaaacccactggcttaagc 334
Query: 61 catgccctcggcaaatctggatgctgaaaagcagaaattagcctgtcaaacaagcatgtg 120
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cttgccctcagcaaatctggatgctgaaaagcagaaattagcctgtcaaacaagcatgtg 274
Query: 121 tgtaagttctattcatggactccatcagcacatatctgtgggctttgtttgcctttacca 180
|||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 273 tgtaagttctatacatggactccatcagtacatatctgtgggctttatttgcctttacca 214
Query: 181 tgtgtaagaaagg 193
|||| ||||||||
Sbjct: 213 tgtgcaagaaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no210_i14.g1 MSMg01no210_i14.g1 CHROMAT_FILE:
MSMg01no210_i14.g1 PHD_FILE: MSMg01no210_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:07 2005
(291 letters)
>mm_chr2_113944953_113945645
Length = 693
Score = 509 bits (263), Expect = e-148
Identities = 285/293 (97%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 1 tctttgtattttgctatgactgagtaggtagaatatttagttacattcctatcatgaga- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttgtattttgctatgactgagtaggtagaatatttagttacattcctatcatgagag 260
Query: 60 -agggggggatataaaaatagtaggagtaaggaaaatgacttcaaaggcagcaatcttgg 118
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggggggggatataagaatagtaggagtaaggaaaatgacttcaaaggcagcaatcttgg 320
Query: 119 ctttagcttggagttgtttacaaagaaaacagaaccataaaacaaaaccacagggcctgg 178
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 ctttagcttggagttgtttacaaagaaaacagaatcataaaacaaaaccacagggcctgg 380
Query: 179 tgagatggctcagggtaaaggtgcttgtcaccaagcctgcgaccctgtgacccgggctgg 238
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagatggctcggggtaaaggtgcttgtcaccaagcctgcgaccctgtgacccgggctgg 440
Query: 239 accgctggagtccacagtgtgaaaagggagaaccaacttcacaaagatgtctg 291
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 441 accgctggagtccacagtgtgaaaagggagaaccaactccacaaagctgtctg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 693
Length adjustment: 9
Effective length of query: 282
Effective length of database: 684
Effective search space: 192888
Effective search space used: 192888
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
