Query= MSMg01no211_k02.b1 MSMg01no211_k02.b1 CHROMAT_FILE:
MSMg01no211_k02.b1 PHD_FILE: MSMg01no211_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:55 2005
(368 letters)
>mm_chr2_67428666_67429436
Length = 771
Score = 625 bits (323), Expect = 0.0
Identities = 347/357 (97%), Gaps = 6/357 (1%)
Strand = Plus / Plus
Query: 15 gaatt-aagttctgactgttttttttt--aaataatttttttcctgacaaactttcatat 71
||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 212 gaattcaagttctgactgtttttttttttaaataatttttttcctgacaaactttcatat 271
Query: 72 aacaaatgtaaccaatatcaacaggaaaaaaaaaa---ccctcaagttggttaactatag 128
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 272 aacaaatgtaaccaatatcaacaggaaaaaaaaaaaaaccctcaagttggttaactatag 331
Query: 129 actgtgtttagttaccttttacgtgataaactgcttgatgaaagcatctttgtcttatgg 188
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 332 actgtgtttagttaccttttacgtgataagctgcttgatgacagcatctttgtcttatgg 391
Query: 189 attttgggtatatagtctgtcatgactaggaaggtatgacaaagctcatggccgcaagag 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 attttgggtatatagtctgtcatgactaggaaggtatgacaaagctcatggccgcaagag 451
Query: 249 tttggcgaggaccaggaagcagagagcagggaatggtagtgttcatcctttctcatctaa 308
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 452 tttggtgaggaccaggaagcagagagcagggaatggtagtgttcatcttttctcatctaa 511
Query: 309 ttcagcctgggccgcatgccattctggtgagaccttccctctatactaatttcctta 365
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ttcagcctgggccgcatgccattctggtgagaccttccctctatactaatttcctta 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 771
Length adjustment: 9
Effective length of query: 359
Effective length of database: 762
Effective search space: 273558
Effective search space used: 273558
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no211_k02.g1 MSMg01no211_k02.g1 CHROMAT_FILE:
MSMg01no211_k02.g1 PHD_FILE: MSMg01no211_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:56 2005
(325 letters)
>mm_chr2_67578454_67579178
Length = 725
Score = 567 bits (293), Expect = e-166
Identities = 314/321 (97%)
Strand = Plus / Minus
Query: 5 tttgtgtttatagtcatttttacactaaggaatatgttttgagatagaaatactaaggat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tttgtgtttatagtcatttttacactaaggaatatgttttgagatagaaatactaaggat 339
Query: 65 gtcaccaagaggggctatactaaacagaattataataatacagcatattgatttataatt 124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 338 gtcaccaagaggggctatactaaacagaattgtaataatacagcatattgatttataatt 279
Query: 125 atttttcataaaatgtatgatcacaaggcttttatatctgactttatacttacatattta 184
||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 278 atttttcataaaacataagatcacaaggcttatatatctgactttatacttacatattta 219
Query: 185 aatataatattgtaagctaggcggtggtggcatacaattttaatcccagcacttgggagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aatataatattgtaagctaggcggtggtggcatacaattttaatcccagcacttgggagg 159
Query: 245 cagaggcaggtggatttctgagtttgaggccagcctgatctacaaagtgagttccaggaa 304
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 cagaggcaggtggattactgagtttgaggccagcctgatctacaaagtgagttccaggaa 99
Query: 305 agctagagctatacagagaaa 325
||||||||||||||| |||||
Sbjct: 98 agctagagctatacaaagaaa 78
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
