Query= MSMg01no214_l21.b1 MSMg01no214_l21.b1 CHROMAT_FILE:
MSMg01no214_l21.b1 PHD_FILE: MSMg01no214_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:09 2005
(712 letters)
>mm_chr2_96397287_96398398
Length = 1112
Score = 1268 bits (656), Expect = 0.0
Identities = 695/708 (98%), Gaps = 2/708 (0%)
Strand = Plus / Plus
Query: 5 gaattcacagtagtgagagtgataagagtctgcatgtgggacagacaggacattgaagtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacagtagtgagagtgataagagtctgcatgtgggacagacaggacattgaagtt 264
Query: 65 tatgcctctcagcctacaattagtctgtggaaaatataaaagcaatgttcacttttgagg 124
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 tatgcctctcagcctaaaattagtctgtggaaaatataaaaacaatgttcacttttgagg 324
Query: 125 agaaaatatgtgtatgtcttgatgatatgtcttttctttatgaagagtctgaacagagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agaaaatatgtgtatgtcttgatgatatgtcttttctttatgaagagtctgaacagagga 384
Query: 185 actggagagctatgttaagaatttctattaaagagaatgaatttatgaaattcctagcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actggagagctatgttaagaatttctattaaagagaatgaatttatgaaattcctagcca 444
Query: 245 aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaaaggaactcac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaaaggaactcac 504
Query: 305 acaatatgtactcactgataa-taggatattacccccaaacctaggatacccaagataga 363
||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 505 acaatatgtactcactgataagt-ggatattatccccaaacctaggatacccaagataga 563
Query: 364 agataaaatttcctaaacacatgaaactcaagaaaaatgaagactgaagtgtggacacta 423
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agatacaatttcctaaacacatgaaactcaagaaaaatgaagactgaagtgtggacacta 623
Query: 424 tgcccctccttagaagtgggaacaagacacccatggaaggagttacagagacaaagtttg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgcccctccttagaagtgggaacaagacacccatggaaggagttacagagacaaagtttg 683
Query: 484 gagctgagatgaaaggatggaccatgtagagactgccatatccaggcatccaccccataa 543
||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 684 gagctgagatgaaagaatgaaccatgtagagactgccatatccagggatccaccccataa 743
Query: 544 tcagcatccaaacgctgacaccattgcatacactagcaagattttattgaaaggaccctg 603
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 744 tcagcatccaagcgctgacaccattgcatacactagcaagattttatcgaaaggaccctg 803
Query: 604 atatagctgtctcttgtgagactatgccggggcctagcaaacacagaagtggatgctcac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 atatagctgtctcttgtgagactatgccggggcctagcaaacacagaagtggatgctcac 863
Query: 664 agtcacctaatggatggatcacagggctcccagtggaggagctagaga 711
||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 864 agtcagctaatggatggatcacagggctcccaatggaggagctagaga 911
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 712
Length of database: 1112
Length adjustment: 10
Effective length of query: 702
Effective length of database: 1102
Effective search space: 773604
Effective search space used: 773604
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no214_l21.g1 MSMg01no214_l21.g1 CHROMAT_FILE:
MSMg01no214_l21.g1 PHD_FILE: MSMg01no214_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:09 2005
(679 letters)
>mm_chr2_96415396_96416474
Length = 1079
Score = 717 bits (371), Expect = 0.0
Identities = 377/379 (99%)
Strand = Plus / Minus
Query: 1 acttctttgttagtagtgaagctagtgttttagagcaatattcaaaaaacaaagtcagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acttctttgttagtagtgaagctagtgttttagagcaatattcaaaaaacaaagtcagcc 320
Query: 61 tcagcatcccgtgtgtcttgttccttttgtgtcaggcttatgggtagttttcttagattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcagcatcccgtgtgtcttgttccttttgtgtcaggcttatgggtagttttcttagattt 260
Query: 121 ttattttttaaatcatatttccttatttatttgtaaggacagacgatgatgcctcttcac 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttattttttaaatcatattttcttatttatttgtaaggacagacgatgatgcctcttcac 200
Query: 181 caccgaatgcatccagaagtcagagacaacttgcaggatctggttctttctttacaccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 caccgaatgcatccagaagtcagagacaacttgcaggatctggttctttctttacaccat 140
Query: 241 gtgggtcccaggagttgaactcaggtatccaggctcagactcaccctctgaaactgtctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gtgggtcccaggagttgaactcaggtatccaggctcagactcaccctctgaaactgtctt 80
Query: 301 gtgagacgagttagcttagttctgtagaagatacctggcatgagttcacttttgctttct 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 gtgagatgagttagcttagttctgtagaagatacctggcatgagttcacttttgctttct 20
Query: 361 atgcatttgcttatttttg 379
|||||||||||||||||||
Sbjct: 19 atgcatttgcttatttttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
